RNA–Protein interactions for RNA: ENST00000497750.1

CDKN2A-207, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 4 BASIC

Gene CDKN2A, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-207ENST00000497750 SUGT1Q9Y2Z0 365 aa28.5■■■□□ 2.15
CDKN2A-207ENST00000497750 SLC5A1P13866 664 aa28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 DGKZQ13574 1117 aa28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 NBPF12Q5TAG4 269 aaPredicted RBP28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 SPRYD7Q5W111 196 aa28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 TDRD3Q9H7E2 651 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 LRRFIP2Q9Y608 721 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-207ENST00000497750 SREBF2Q12772 1141 aa28.48■■■□□ 2.15
CDKN2A-207ENST00000497750 MEIS3Q99687 375 aa28.48■■■□□ 2.15
CDKN2A-207ENST00000497750 LAMB1P07942 1786 aa28.47■■■□□ 2.15
CDKN2A-207ENST00000497750 ZBTB48P10074 688 aaPredicted RBP28.46■■■□□ 2.15
CDKN2A-207ENST00000497750 TEKT1Q969V4 418 aa28.46■■■□□ 2.15
CDKN2A-207ENST00000497750 TEPSINQ96N21 525 aa28.46■■■□□ 2.15
CDKN2A-207ENST00000497750 CFHR5Q9BXR6 569 aa28.46■■■□□ 2.15
CDKN2A-207ENST00000497750 COPRSQ9NQ92 184 aa28.46■■■□□ 2.15
CDKN2A-207ENST00000497750 MAST3O60307 1309 aa28.45■■■□□ 2.15
CDKN2A-207ENST00000497750 IL15P40933 162 aaPredicted RBP28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 IREB2P48200 963 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 MKRN3Q13064 507 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 NOM1Q5C9Z4 860 aaKnown RBP28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 SLC10A4Q96EP9 437 aa28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 ZDHHC15Q96MV8 337 aa28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 SIL1Q9H173 461 aa28.45■■■□□ 2.14
CDKN2A-207ENST00000497750 ZBTB22O15209 634 aa28.44■■■□□ 2.14
CDKN2A-207ENST00000497750 USP2O75604 605 aaPredicted RBP28.44■■■□□ 2.14
CDKN2A-207ENST00000497750 CLMNQ96JQ2 1002 aa28.44■■■□□ 2.14
CDKN2A-207ENST00000497750 CEP126Q9P2H0 1117 aa28.44■■■□□ 2.14
CDKN2A-207ENST00000497750 GNAI3P08754 354 aa28.43■■■□□ 2.14
CDKN2A-207ENST00000497750 MTX1Q13505 466 aa28.43■■■□□ 2.14
CDKN2A-207ENST00000497750 ATP2B3Q16720 1220 aa28.43■■■□□ 2.14
CDKN2A-207ENST00000497750 WDR66Q8TBY9 1149 aa28.43■■■□□ 2.14
CDKN2A-207ENST00000497750 WNK4Q96J92 1243 aa28.43■■■□□ 2.14
CDKN2A-207ENST00000497750 MANSC4A6NHS7 340 aaPredicted RBP28.42■■■□□ 2.14
CDKN2A-207ENST00000497750 CCDC85CA6NKD9 419 aa28.42■■■□□ 2.14
CDKN2A-207ENST00000497750 IPO8O15397 1037 aaKnown RBP28.42■■■□□ 2.14
CDKN2A-207ENST00000497750 TRIM27P14373 513 aa28.42■■■□□ 2.14
CDKN2A-207ENST00000497750 TNNI2P48788 182 aa28.42■■■□□ 2.14
CDKN2A-207ENST00000497750 INHBEP58166 350 aa28.41■■■□□ 2.14
CDKN2A-207ENST00000497750 HHIPL2Q6UWX4 724 aa28.41■■■□□ 2.14
CDKN2A-207ENST00000497750 ANKRD13AQ8IZ07 590 aa28.41■■■□□ 2.14
CDKN2A-207ENST00000497750 PA2G4Q9UQ80 394 aaKnown RBP28.41■■■□□ 2.14
CDKN2A-207ENST00000497750 MYH13Q9UKX3 1938 aa28.41■■■□□ 2.14
CDKN2A-207ENST00000497750 TCP10L2B9ZVM9 353 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 TBC1D8O95759 1140 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 FKBP1CQ5VVH2 108 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 APOBEC3HQ6NTF7 200 aaKnown RBP28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 ATF7IPQ6VMQ6 1270 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 CTU1Q7Z7A3 348 aaKnown RBP28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 CDAN1Q8IWY9 1227 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 TMEM39BQ9GZU3 492 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 OTOFQ9HC10 1997 aa28.4■■■□□ 2.14
CDKN2A-207ENST00000497750 ALDH1A1P00352 501 aa28.39■■■□□ 2.14
CDKN2A-207ENST00000497750 BCAR3O75815 825 aa28.38■■■□□ 2.13
CDKN2A-207ENST00000497750 RGS19P49795 217 aa28.38■■■□□ 2.13
CDKN2A-207ENST00000497750 FAM83AQ86UY5 434 aa28.38■■■□□ 2.13
CDKN2A-207ENST00000497750 ZNF296Q8WUU4 475 aaPredicted RBP28.38■■■□□ 2.13
CDKN2A-207ENST00000497750 SEMA3EO15041 775 aa28.37■■■□□ 2.13
CDKN2A-207ENST00000497750 MIER1Q8N108 512 aa28.37■■■□□ 2.13
CDKN2A-207ENST00000497750 GNL3LQ9NVN8 582 aaKnown RBP28.37■■■□□ 2.13
CDKN2A-207ENST00000497750 SALL1Q9NSC2 1324 aa28.37■■■□□ 2.13
CDKN2A-207ENST00000497750 RPAP1Q9BWH6 1393 aaPredicted RBP28.37■■■□□ 2.13
CDKN2A-207ENST00000497750 GPR25O00155 361 aa28.36■■■□□ 2.13
CDKN2A-207ENST00000497750 GJA5P36382 358 aa28.36■■■□□ 2.13
CDKN2A-207ENST00000497750 IFNL1Q8IU54 200 aa28.36■■■□□ 2.13
CDKN2A-207ENST00000497750 TMOD2Q9NZR1 351 aa28.36■■■□□ 2.13
CDKN2A-207ENST00000497750 SRGAP3O43295 1099 aa28.35■■■□□ 2.13
CDKN2A-207ENST00000497750 DENND2AQ9ULE3 1009 aa28.35■■■□□ 2.13
CDKN2A-207ENST00000497750 TNNQ9UQP3 1299 aa28.35■■■□□ 2.13
CDKN2A-207ENST00000497750 PHKA1P46020 1223 aa28.34■■■□□ 2.13
CDKN2A-207ENST00000497750 CACNB3P54284 484 aa28.34■■■□□ 2.13
CDKN2A-207ENST00000497750 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-207ENST00000497750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.34■■■□□ 2.13
CDKN2A-207ENST00000497750 FRAT1Q92837 279 aaPredicted RBP28.34■■■□□ 2.13
CDKN2A-207ENST00000497750 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 IGF2BP3O00425 579 aaKnown RBP eCLIP28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 PRDX5P30044 214 aa28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 DIEXFQ68CQ4 756 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 R3HDMLQ9H3Y0 253 aa28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 PDS5AQ29RF7 1337 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-207ENST00000497750 HNRNPUQ00839 825 aaKnown RBP eCLIP28.32■■■□□ 2.12
CDKN2A-207ENST00000497750 PKN2Q16513 984 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-207ENST00000497750 CCDC102BQ68D86 513 aa28.32■■■□□ 2.12
CDKN2A-207ENST00000497750 DAGLAQ9Y4D2 1042 aa28.32■■■□□ 2.12
CDKN2A-207ENST00000497750 GNAI2P04899 355 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 ADORA1P30542 326 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 MAP3K9P80192 1104 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 VGLL4Q14135 290 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 OPTNQ96CV9 577 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 ELP3Q9H9T3 547 aa28.31■■■□□ 2.12
CDKN2A-207ENST00000497750 LDHBP07195 334 aaKnown RBP28.3■■■□□ 2.12
CDKN2A-207ENST00000497750 DIXDC1Q155Q3 683 aa28.3■■■□□ 2.12
CDKN2A-207ENST00000497750 ZKSCAN2Q63HK3 967 aa28.3■■■□□ 2.12
CDKN2A-207ENST00000497750 HOOK2Q96ED9 719 aa28.3■■■□□ 2.12
CDKN2A-207ENST00000497750 AKAP2Q9Y2D5 859 aa28.3■■■□□ 2.12
CDKN2A-207ENST00000497750 FKTNO75072 461 aa28.29■■■□□ 2.12
CDKN2A-207ENST00000497750 CLUAP1Q96AJ1 413 aa28.29■■■□□ 2.12
CDKN2A-207ENST00000497750 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.29■■■□□ 2.12
CDKN2A-207ENST00000497750 A0A1B0GUL7 405 aa28.28■■■□□ 2.12
CDKN2A-207ENST00000497750 TIMM10P62072 90 aa28.28■■■□□ 2.12
CDKN2A-207ENST00000497750 TFCP2Q12800 502 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms