RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 FAM95CA0A1B0GW59 222 aa7□□□□□ -1.29
CBX3-208ENST00000497498 WDR64B1ANS9 1081 aa7□□□□□ -1.29
CBX3-208ENST00000497498 ADAMTS4O75173 837 aa7□□□□□ -1.29
CBX3-208ENST00000497498 MAOBP27338 520 aa7□□□□□ -1.29
CBX3-208ENST00000497498 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
CBX3-208ENST00000497498 RETREG2Q8NC44 543 aa7□□□□□ -1.29
CBX3-208ENST00000497498 EZH1Q92800 747 aaPredicted RBP7□□□□□ -1.29
CBX3-208ENST00000497498 MFSD14AQ96MC6 490 aa7□□□□□ -1.29
CBX3-208ENST00000497498 DNAJC25Q9H1X3 360 aa7□□□□□ -1.29
CBX3-208ENST00000497498 ZNF576Q9H609 170 aa7□□□□□ -1.29
CBX3-208ENST00000497498 COL17A1Q9UMD9 1497 aaPredicted RBP6.99□□□□□ -1.29
CBX3-208ENST00000497498 GPR182O15218 404 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 F13BP05160 661 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 CTSBP07858 339 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 ADH5P11766 374 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 RXRBP28702 533 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 PTPN12Q05209 780 aaKnown RBP6.99□□□□□ -1.29
CBX3-208ENST00000497498 PDE4CQ08493 712 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 POU4F3Q15319 338 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 CPSF6Q16630 551 aaKnown RBP eCLIP6.99□□□□□ -1.29
CBX3-208ENST00000497498 MCTP1Q6DN14 999 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 ERICH6Q7L0X2 663 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 FBLIM1Q8WUP2 373 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 TRIM56Q9BRZ2 755 aaKnown RBP6.99□□□□□ -1.29
CBX3-208ENST00000497498 EHD4Q9H223 541 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 NPHS2Q9NP85 383 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 PIM2Q9P1W9 311 aa6.99□□□□□ -1.29
CBX3-208ENST00000497498 OAS3Q9Y6K5 1087 aaKnown RBP6.99□□□□□ -1.29
CBX3-208ENST00000497498 EIF1AYO14602 144 aaKnown RBP6.98□□□□□ -1.29
CBX3-208ENST00000497498 USP11P51784 963 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 GP2P55259 537 aaKnown RBP6.98□□□□□ -1.29
CBX3-208ENST00000497498 HP1BP3Q5SSJ5 553 aaPredicted RBP6.98□□□□□ -1.29
CBX3-208ENST00000497498 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
CBX3-208ENST00000497498 PAOXQ6QHF9 649 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 GIMAP7Q8NHV1 300 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
CBX3-208ENST00000497498 CCDC74AQ96AQ1 378 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 ARID3AQ99856 593 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 ZFYVE1Q9HBF4 777 aa6.98□□□□□ -1.29
CBX3-208ENST00000497498 HOXA10P31260 410 aaPredicted RBP6.97□□□□□ -1.29
CBX3-208ENST00000497498 NFKBIBQ15653 356 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 CCER1Q8TC90 406 aaPredicted RBP6.97□□□□□ -1.29
CBX3-208ENST00000497498 ALKBH8Q96BT7 664 aaKnown RBP6.97□□□□□ -1.29
CBX3-208ENST00000497498 RBCK1Q9BYM8 510 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 NIF3L1Q9GZT8 377 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 ATG3Q9NT62 314 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 ACTL7BQ9Y614 415 aa6.97□□□□□ -1.29
CBX3-208ENST00000497498 ECEL1O95672 775 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 FOSL1P15407 271 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 RPS26P11Q5JNZ5 115 aaPredicted RBP6.96□□□□□ -1.3
CBX3-208ENST00000497498 SHISA5Q8N114 240 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 FBXL6Q8N531 539 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 DMRTB1Q96MA1 342 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 CORO1BQ9BR76 489 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 YIPF2Q9BWQ6 316 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 GSX1Q9H4S2 264 aaPredicted RBP6.96□□□□□ -1.3
CBX3-208ENST00000497498 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 SYNGAP1Q96PV0 1343 aa6.96□□□□□ -1.3
CBX3-208ENST00000497498 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 SUPT5HO00267 1087 aaKnown RBP6.95□□□□□ -1.3
CBX3-208ENST00000497498 WNT11O96014 354 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 ADMP35318 185 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 GATA6Q92908 595 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 CSRNP1Q96S65 589 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 METTL22Q9BUU2 404 aaPredicted RBP6.95□□□□□ -1.3
CBX3-208ENST00000497498 OSBPL1AQ9BXW6 950 aa6.95□□□□□ -1.3
CBX3-208ENST00000497498 SOWAHDA6NJG2 315 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 IRAK1P51617 712 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 AP3B2Q13367 1082 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 ACSS3Q9H6R3 686 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
CBX3-208ENST00000497498 GNEQ9Y223 722 aaKnown RBP6.94□□□□□ -1.3
CBX3-208ENST00000497498 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
CBX3-208ENST00000497498 AOC2O75106 756 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 MAP7Q14244 749 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 GRM2Q14416 872 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 AKAP4Q5JQC9 854 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 DYMQ7RTS9 669 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 EPS8L3Q8TE67 593 aaKnown RBP6.93□□□□□ -1.3
CBX3-208ENST00000497498 SEMA6CQ9H3T2 930 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 RAD18Q9NS91 495 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 FAM105AQ9NUU6 356 aa6.93□□□□□ -1.3
CBX3-208ENST00000497498 GADD45BO75293 160 aaPredicted RBP6.92□□□□□ -1.3
CBX3-208ENST00000497498 PRNPP04156 253 aa6.92□□□□□ -1.3
CBX3-208ENST00000497498 NFICP08651 508 aa6.92□□□□□ -1.3
CBX3-208ENST00000497498 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
CBX3-208ENST00000497498 TBC1D32Q96NH3 1257 aa6.92□□□□□ -1.3
CBX3-208ENST00000497498 WDR18Q9BV38 432 aa6.92□□□□□ -1.3
CBX3-208ENST00000497498 ASPAP45381 313 aa6.91□□□□□ -1.3
CBX3-208ENST00000497498 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
CBX3-208ENST00000497498 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
CBX3-208ENST00000497498 FAM170BA6NMN3 283 aa6.9□□□□□ -1.3
CBX3-208ENST00000497498 CYP26A1O43174 497 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms