RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 HDAC9Q9UKV0 1011 aa23.87■■□□□ 1.41
SCAMP3-209ENST00000497470 TIAM2Q8IVF5 1701 aa23.87■■□□□ 1.41
SCAMP3-209ENST00000497470 RNF113AO15541 343 aaKnown RBP23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 PRDX5P30044 214 aa23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 ADD2P35612 726 aa23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 ZNF280AP59817 542 aaPredicted RBP23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 TBC1D9Q6ZT07 1266 aa23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 OGFOD1Q8N543 542 aa23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 FSD1Q9BTV5 496 aa23.86■■□□□ 1.41
SCAMP3-209ENST00000497470 GLTPD2A6NH11 291 aa23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 IDH1O75874 414 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 SKAP1Q86WV1 359 aa23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 RILPL2Q969X0 211 aa23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 EDC3Q96F86 508 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 MAST2Q6P0Q8 1798 aa23.85■■□□□ 1.41
SCAMP3-209ENST00000497470 GAKO14976 1311 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 USP17L8P0C7I0 530 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 PDE6AP16499 860 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 MECOMQ03112 1051 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 SLC9C2Q5TAH2 1124 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 DZIP1Q86YF9 867 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 HELLSQ9NRZ9 838 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 RAI14Q9P0K7 980 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 NDUFB9Q9Y6M9 179 aa23.84■■□□□ 1.41
SCAMP3-209ENST00000497470 TCRBV5S4A2TA0A5A2 114 aa23.83■■□□□ 1.41
SCAMP3-209ENST00000497470 PPP4CP60510 307 aa23.83■■□□□ 1.41
SCAMP3-209ENST00000497470 NAA16Q6N069 864 aaPredicted RBP23.83■■□□□ 1.41
SCAMP3-209ENST00000497470 RUFY2Q8WXA3 655 aa23.83■■□□□ 1.41
SCAMP3-209ENST00000497470 APPBP2Q92624 585 aa23.83■■□□□ 1.41
SCAMP3-209ENST00000497470 RAD50Q92878 1312 aa23.83■■□□□ 1.4
SCAMP3-209ENST00000497470 ZMYM1Q5SVZ6 1142 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 CASC1Q6TDU7 716 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 FBXW7Q969H0 707 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 TEKT1Q969V4 418 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 ZDHHC15Q96MV8 337 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 MYH7P12883 1935 aa23.82■■□□□ 1.4
SCAMP3-209ENST00000497470 GPR75-ASB3A0A0A6YYF3 556 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 CDC45O75419 566 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 CHMLP26374 656 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 ZNF384Q8TF68 577 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 GPRC5DQ9NZD1 345 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 GOLGB1Q14789 3259 aaKnown RBP23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 MROH7-TTC4A0A0A0MT08 1334 aa23.81■■□□□ 1.4
SCAMP3-209ENST00000497470 AK9Q5TCS8 1911 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 BAG3O95817 575 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 PLCG2P16885 1265 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 GMPSP49915 693 aaPredicted RBP23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 KIAA0825Q8IV33 1275 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 MAGEB6Q8N7X4 407 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 JAG2Q9Y219 1238 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 ZNF532Q9HCE3 1301 aa23.8■■□□□ 1.4
SCAMP3-209ENST00000497470 H7C1D1 291 aa23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 EPB41L2O43491 1005 aaKnown RBP23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 MFAP1P55081 439 aaKnown RBP23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 GRIK5Q16478 980 aa23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 ZBED3Q96IU2 234 aaPredicted RBP23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
SCAMP3-209ENST00000497470 RPAP1Q9BWH6 1393 aaPredicted RBP23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 CYP7A1P22680 504 aa23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 CRKP46108 304 aa23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 SCNN1DP51172 638 aa23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 MXD3Q9BW11 206 aa23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 CNOT7Q9UIV1 285 aaKnown RBP23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 ZBTB12Q9Y330 459 aaPredicted RBP23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 GJA3Q9Y6H8 435 aa23.78■■□□□ 1.4
SCAMP3-209ENST00000497470 WDR90Q96KV7 1748 aa23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 IQCA1LA6NCM1 817 aa23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 NPM3O75607 178 aaKnown RBP23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 DDNO94850 711 aaPredicted RBP23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 MCMDC2Q4G0Z9 681 aa23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 MYO5AQ9Y4I1 1855 aaKnown RBP23.77■■□□□ 1.4
SCAMP3-209ENST00000497470 GNAT2P19087 354 aa23.76■■□□□ 1.39
SCAMP3-209ENST00000497470 LMOD1P29536 600 aaPredicted RBP23.76■■□□□ 1.39
SCAMP3-209ENST00000497470 NOL10Q9BSC4 688 aaKnown RBP23.76■■□□□ 1.39
SCAMP3-209ENST00000497470 DAGLAQ9Y4D2 1042 aa23.76■■□□□ 1.39
SCAMP3-209ENST00000497470 SCN4AP35499 1836 aa23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 FKBP1CQ5VVH2 108 aa23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 APOBEC3HQ6NTF7 200 aaKnown RBP23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 MICALL2Q8IY33 904 aa23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 OSBP2Q969R2 916 aa23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 RIOK1Q9BRS2 568 aaKnown RBP23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 MYOZ2Q9NPC6 264 aa23.75■■□□□ 1.39
SCAMP3-209ENST00000497470 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
SCAMP3-209ENST00000497470 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
SCAMP3-209ENST00000497470 DLGAP5Q15398 846 aa23.74■■□□□ 1.39
SCAMP3-209ENST00000497470 ADARB2Q9NS39 739 aaKnown RBP23.74■■□□□ 1.39
SCAMP3-209ENST00000497470 MYH2Q9UKX2 1941 aa23.74■■□□□ 1.39
SCAMP3-209ENST00000497470 SGSM2O43147 1006 aa23.73■■□□□ 1.39
SCAMP3-209ENST00000497470 DIXDC1Q155Q3 683 aa23.73■■□□□ 1.39
SCAMP3-209ENST00000497470 CFAP100Q494V2 611 aa23.73■■□□□ 1.39
SCAMP3-209ENST00000497470 GIMAP6Q6P9H5 292 aa23.73■■□□□ 1.39
SCAMP3-209ENST00000497470 HACL1Q9UJ83 578 aa23.73■■□□□ 1.39
SCAMP3-209ENST00000497470 MAGEB6P1A0A0J9YX57 407 aa23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 F8W031 263 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 NMIQ13287 307 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 USP50Q70EL3 339 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 ZC3H15Q8WU90 426 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 AIDAQ96BJ3 306 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms