RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 TFCP2Q12800 502 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 TEPSINQ96N21 525 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 ZBTB40Q9NUA8 1239 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 SSC5DA1L4H1 1573 aa13.53□□□□□ -0.24
SHROOM3-210ENST00000497440 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 AOC2O75106 756 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 SLC10A3P09131 477 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 COL13A1Q5TAT6 717 aaPredicted RBP13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 CEP85Q6P2H3 762 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 PANK1Q8TE04 598 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 XAGE2Q96GT9 111 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
SHROOM3-210ENST00000497440 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
SHROOM3-210ENST00000497440 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
SHROOM3-210ENST00000497440 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
SHROOM3-210ENST00000497440 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
SHROOM3-210ENST00000497440 MYO1BO43795 1136 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 RASGRF1Q13972 1273 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 RASA3Q14644 834 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 MVPQ14764 893 aaKnown RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 MOB2Q70IA6 237 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 FAM83AQ86UY5 434 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 TEKT1Q969V4 418 aa13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
SHROOM3-210ENST00000497440 MAST3O60307 1309 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 UBE2Q2LH0YL09 131 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 CA12O43570 354 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 PRDX5P30044 214 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 ZNF157P51786 506 aaPredicted RBP13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 CHAF1AQ13111 956 aaPredicted RBP13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 NBPF12Q5TAG4 269 aaPredicted RBP13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 ZNF384Q8TF68 577 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
SHROOM3-210ENST00000497440 GAKO14976 1311 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 IGSF3O75054 1194 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 TM4SF4P48230 202 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 MYH13Q9UKX3 1938 aa13.48□□□□□ -0.25
SHROOM3-210ENST00000497440 AKAP11Q9UKA4 1901 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 NF2P35240 595 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 SAGE1Q9NXZ1 904 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 DAGLAQ9Y4D2 1042 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 LAMB1P07942 1786 aa13.47□□□□□ -0.25
SHROOM3-210ENST00000497440 SURF6O75683 361 aaKnown RBP13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 MAP3K10Q02779 954 aa13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 EAF2Q96CJ1 260 aaPredicted RBP13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
SHROOM3-210ENST00000497440 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 LDHBP07195 334 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 MCAMP43121 646 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 LBX1P52954 281 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 AIDAQ96BJ3 306 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 VEZTQ9HBM0 779 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
SHROOM3-210ENST00000497440 GPR75-ASB3A0A0A6YYF3 556 aa13.44□□□□□ -0.26
SHROOM3-210ENST00000497440 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
SHROOM3-210ENST00000497440 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
SHROOM3-210ENST00000497440 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
SHROOM3-210ENST00000497440 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms