RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 NOB1Q9ULX3 412 aaKnown RBP21.46■■□□□ 1.03
SMC4-226ENST00000497311 CCER2I3L3R5 266 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 EYA2O00167 538 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 USP2O75604 605 aaPredicted RBP21.45■■□□□ 1.02
SMC4-226ENST00000497311 ALDH1A1P00352 501 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 RFX5P48382 616 aaPredicted RBP21.45■■□□□ 1.02
SMC4-226ENST00000497311 HDLBPQ00341 1268 aaKnown RBP21.45■■□□□ 1.02
SMC4-226ENST00000497311 GRIK5Q16478 980 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 NOM1Q5C9Z4 860 aaKnown RBP21.45■■□□□ 1.02
SMC4-226ENST00000497311 CFHR5Q9BXR6 569 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 KIF16BQ96L93 1317 aa21.45■■□□□ 1.02
SMC4-226ENST00000497311 GPR25O00155 361 aa21.44■■□□□ 1.02
SMC4-226ENST00000497311 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
SMC4-226ENST00000497311 FGFR2P21802 821 aa21.44■■□□□ 1.02
SMC4-226ENST00000497311 TNNI2P48788 182 aa21.44■■□□□ 1.02
SMC4-226ENST00000497311 ANKRD13AQ8IZ07 590 aa21.44■■□□□ 1.02
SMC4-226ENST00000497311 WNK4Q96J92 1243 aa21.44■■□□□ 1.02
SMC4-226ENST00000497311 TCP10L2B9ZVM9 353 aa21.43■■□□□ 1.02
SMC4-226ENST00000497311 SLC5A1P13866 664 aa21.43■■□□□ 1.02
SMC4-226ENST00000497311 PKN2Q16513 984 aaKnown RBP21.43■■□□□ 1.02
SMC4-226ENST00000497311 TEKT1Q969V4 418 aa21.43■■□□□ 1.02
SMC4-226ENST00000497311 API5Q9BZZ5 524 aaKnown RBP21.43■■□□□ 1.02
SMC4-226ENST00000497311 IFNL1Q8IU54 200 aa21.42■■□□□ 1.02
SMC4-226ENST00000497311 LPIN2Q92539 896 aa21.42■■□□□ 1.02
SMC4-226ENST00000497311 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
SMC4-226ENST00000497311 FKTNO75072 461 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 ATG9AQ7Z3C6 839 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 TEPSINQ96N21 525 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 MRIQ9BWK5 157 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 TMEM39BQ9GZU3 492 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 R3HDMLQ9H3Y0 253 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 FBXO3Q9UK99 471 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 SUGT1Q9Y2Z0 365 aa21.41■■□□□ 1.02
SMC4-226ENST00000497311 MAST3O60307 1309 aa21.4■■□□□ 1.02
SMC4-226ENST00000497311 CDAN1Q8IWY9 1227 aa21.39■■□□□ 1.01
SMC4-226ENST00000497311 ZDHHC15Q96MV8 337 aa21.39■■□□□ 1.01
SMC4-226ENST00000497311 SIL1Q9H173 461 aa21.39■■□□□ 1.01
SMC4-226ENST00000497311 TMOD2Q9NZR1 351 aa21.39■■□□□ 1.01
SMC4-226ENST00000497311 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
SMC4-226ENST00000497311 CIAO1O76071 339 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 GJA5P36382 358 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 RARSP54136 660 aaKnown RBP21.38■■□□□ 1.01
SMC4-226ENST00000497311 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 WDR66Q8TBY9 1149 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 ELP3Q9H9T3 547 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 CEP126Q9P2H0 1117 aa21.38■■□□□ 1.01
SMC4-226ENST00000497311 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
SMC4-226ENST00000497311 IGF2BP3O00425 579 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMC4-226ENST00000497311 CACNB3P54284 484 aa21.37■■□□□ 1.01
SMC4-226ENST00000497311 SOX10P56693 466 aa21.37■■□□□ 1.01
SMC4-226ENST00000497311 APOBEC3HQ6NTF7 200 aaKnown RBP21.37■■□□□ 1.01
SMC4-226ENST00000497311 OPTNQ96CV9 577 aa21.37■■□□□ 1.01
SMC4-226ENST00000497311 MAP3K9P80192 1104 aa21.36■■□□□ 1.01
SMC4-226ENST00000497311 ATP2B3Q16720 1220 aa21.36■■□□□ 1.01
SMC4-226ENST00000497311 HHIPL2Q6UWX4 724 aa21.36■■□□□ 1.01
SMC4-226ENST00000497311 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.36■■□□□ 1.01
SMC4-226ENST00000497311 LAMB1P07942 1786 aa21.36■■□□□ 1.01
SMC4-226ENST00000497311 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 IL15P40933 162 aaPredicted RBP21.35■■□□□ 1.01
SMC4-226ENST00000497311 FKBP1CQ5VVH2 108 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 FAM83AQ86UY5 434 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 MEIS3Q99687 375 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 GNL3LQ9NVN8 582 aaKnown RBP21.35■■□□□ 1.01
SMC4-226ENST00000497311 OTOFQ9HC10 1997 aa21.35■■□□□ 1.01
SMC4-226ENST00000497311 TESPA1A2RU30 521 aaPredicted RBP21.34■■□□□ 1.01
SMC4-226ENST00000497311 FBXO46Q6PJ61 603 aaPredicted RBP21.34■■□□□ 1.01
SMC4-226ENST00000497311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMC4-226ENST00000497311 PA2G4Q9UQ80 394 aaKnown RBP21.34■■□□□ 1.01
SMC4-226ENST00000497311 CSADQ9Y600 493 aa21.34■■□□□ 1.01
SMC4-226ENST00000497311 VGLL4Q14135 290 aa21.33■■□□□ 1.01
SMC4-226ENST00000497311 HOOK2Q96ED9 719 aa21.33■■□□□ 1.01
SMC4-226ENST00000497311 COPRSQ9NQ92 184 aa21.33■■□□□ 1.01
SMC4-226ENST00000497311 GNAI3P08754 354 aa21.32■■□□□ 1
SMC4-226ENST00000497311 INTS3Q68E01 1043 aaKnown RBP21.32■■□□□ 1
SMC4-226ENST00000497311 PTPN18Q99952 460 aa21.32■■□□□ 1
SMC4-226ENST00000497311 CRHR2Q13324 411 aa21.31■■□□□ 1
SMC4-226ENST00000497311 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
SMC4-226ENST00000497311 MS4A4AQ96JQ5 239 aa21.31■■□□□ 1
SMC4-226ENST00000497311 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
SMC4-226ENST00000497311 SEMA3EO15041 775 aa21.3■■□□□ 1
SMC4-226ENST00000497311 IPO8O15397 1037 aaKnown RBP21.3■■□□□ 1
SMC4-226ENST00000497311 LDHBP07195 334 aaKnown RBP21.3■■□□□ 1
SMC4-226ENST00000497311 PRDX5P30044 214 aa21.3■■□□□ 1
SMC4-226ENST00000497311 PHKA1P46020 1223 aa21.3■■□□□ 1
SMC4-226ENST00000497311 GTF2A2P52657 109 aa21.3■■□□□ 1
SMC4-226ENST00000497311 OTUD5Q96G74 571 aa21.3■■□□□ 1
SMC4-226ENST00000497311 WRNIP1Q96S55 665 aa21.3■■□□□ 1
SMC4-226ENST00000497311 DAGLAQ9Y4D2 1042 aa21.3■■□□□ 1
SMC4-226ENST00000497311 TRIM17Q9Y577 477 aa21.3■■□□□ 1
SMC4-226ENST00000497311 RPAP1Q9BWH6 1393 aaPredicted RBP21.29■■□□□ 1
SMC4-226ENST00000497311 CCL15-CCL14A0A0B4J2E2 113 aa21.29■■□□□ 1
SMC4-226ENST00000497311 DIXDC1Q155Q3 683 aa21.29■■□□□ 1
SMC4-226ENST00000497311 CCL15Q16663 113 aa21.29■■□□□ 1
SMC4-226ENST00000497311 DCAF15Q66K64 600 aa21.29■■□□□ 1
SMC4-226ENST00000497311 FAM151AQ8WW52 585 aa21.29■■□□□ 1
SMC4-226ENST00000497311 ERO1AQ96HE7 468 aa21.29■■□□□ 1
SMC4-226ENST00000497311 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
SMC4-226ENST00000497311 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
SMC4-226ENST00000497311 SRGAP3O43295 1099 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 339.3 ms