RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ALAS2P22557 587 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 MAPK8P45983 427 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 NCAPG2Q86XI2 1143 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 TNFRSF25Q93038 417 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 DMRTB1Q96MA1 342 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 EFCC1Q9HA90 598 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 NAGPAQ9UK23 515 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 KANK1Q14678 1352 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 PIK3C2BO00750 1634 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
MSH5-219ENST00000497269 SCAF11Q99590 1463 aaKnown RBP9.08□□□□□ -0.96
MSH5-219ENST00000497269 ZC3H13Q5T200 1668 aaKnown RBP9.08□□□□□ -0.96
MSH5-219ENST00000497269 ANKRD33BA6NCL7 494 aa9.08□□□□□ -0.96
MSH5-219ENST00000497269 ACPPP15309 386 aa9.08□□□□□ -0.96
MSH5-219ENST00000497269 MFAP1P55081 439 aaKnown RBP9.08□□□□□ -0.96
MSH5-219ENST00000497269 XKR5Q6UX68 686 aa9.08□□□□□ -0.96
MSH5-219ENST00000497269 ASB16Q96NS5 453 aa9.08□□□□□ -0.96
MSH5-219ENST00000497269 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
MSH5-219ENST00000497269 EIF2AK4Q9P2K8 1649 aaKnown RBP9.08□□□□□ -0.96
MSH5-219ENST00000497269 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 FGD6Q6ZV73 1430 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 MAP3K1Q13233 1512 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 GHRHP01286 108 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 GPLD1P80108 840 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 CHSY3Q70JA7 882 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 ANKRD30AQ9BXX3 1397 aa9.07□□□□□ -0.96
MSH5-219ENST00000497269 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 TRPA1O75762 1119 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 IGHA2P01877 340 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
MSH5-219ENST00000497269 NRLP54845 237 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 SIK1P57059 783 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
MSH5-219ENST00000497269 PLCB3Q01970 1234 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 HYAL2Q12891 473 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 PSAPL1Q6NUJ1 521 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 BTBD6Q96KE9 485 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
MSH5-219ENST00000497269 TMEM2Q9UHN6 1383 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 PNMA6FA0A0J9YX94 578 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 ADARB2-AS1A8MUL3 147 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 EIF1AYO14602 144 aaKnown RBP9.05□□□□□ -0.96
MSH5-219ENST00000497269 TREHO43280 583 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 ALBP02768 609 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 ATP11AP98196 1134 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 PERM1Q5SV97 790 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 SPACA7Q96KW9 195 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 SETDB2Q96T68 719 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 JPH1Q9HDC5 661 aaPredicted RBP9.05□□□□□ -0.96
MSH5-219ENST00000497269 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
MSH5-219ENST00000497269 TMEM94Q12767 1356 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 XIRP1Q702N8 1843 aaKnown RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 M0R082 166 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 SOX18P35713 384 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 DNAJC14Q6Y2X3 702 aaPredicted RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 ZNF417Q8TAU3 575 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 ZNF587Q96SQ5 575 aaPredicted RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 ENAMQ9NRM1 1142 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 RGS17Q9UGC6 210 aaPredicted RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
MSH5-219ENST00000497269 PRDM15P57071 1507 aaPredicted RBP9.04□□□□□ -0.96
MSH5-219ENST00000497269 SYNMO15061 1565 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 ARHGAP23Q9P227 1491 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
MSH5-219ENST00000497269 KCNA6P17658 529 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 CSRNP1Q96S65 589 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 MDFIQ99750 246 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 RBSNQ9H1K0 784 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 NPHS2Q9NP85 383 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 ARHGAP31Q2M1Z3 1444 aa9.03□□□□□ -0.96
MSH5-219ENST00000497269 SLIT1O75093 1534 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 EFCAB6Q5THR3 1501 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 NEFLP07196 543 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 IRS1P35568 1242 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 DSC3Q14574 896 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 PCSK7Q16549 785 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 GDF6Q6KF10 455 aaPredicted RBP9.02□□□□□ -0.97
MSH5-219ENST00000497269 ALKBH8Q96BT7 664 aaKnown RBP9.02□□□□□ -0.97
MSH5-219ENST00000497269 PLD4Q96BZ4 506 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 RASSF4Q9H2L5 321 aa9.02□□□□□ -0.97
MSH5-219ENST00000497269 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 RGS9O75916 674 aaPredicted RBP9.01□□□□□ -0.97
MSH5-219ENST00000497269 ARHGEF15O94989 841 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 CEP135Q66GS9 1140 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
MSH5-219ENST00000497269 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms