RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 LRP8Q14114 963 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 KIAA1211Q6ZU35 1233 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
SMC4-225ENST00000497203 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 TRAK1Q9UPV9 953 aa6.77□□□□□ -1.33
SMC4-225ENST00000497203 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 FBF1Q8TES7 1133 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 MEGF10Q96KG7 1140 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 BCL2L13Q9BXK5 485 aa6.76□□□□□ -1.33
SMC4-225ENST00000497203 SOX17Q9H6I2 414 aaPredicted RBP6.76□□□□□ -1.33
SMC4-225ENST00000497203 E9PSI1 815 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 LDHBP07195 334 aaKnown RBP6.75□□□□□ -1.33
SMC4-225ENST00000497203 FCGRTP55899 365 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 GSTM4Q03013 218 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
SMC4-225ENST00000497203 ALG1LQ6GMV1 187 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 Q6ZS46 218 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 BCL11AQ9H165 835 aa6.75□□□□□ -1.33
SMC4-225ENST00000497203 B3GALT4O96024 378 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 ZNF326Q5BKZ1 582 aaKnown RBP6.74□□□□□ -1.33
SMC4-225ENST00000497203 USP26Q9BXU7 913 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
SMC4-225ENST00000497203 LOC100289279A0A1B0GTE1 492 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 DLGAP3O95886 979 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 GLB1P16278 677 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 FGD1P98174 961 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 DTHD1Q6ZMT9 781 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
SMC4-225ENST00000497203 TP53INP1Q96A56 240 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 RNF19AQ9NV58 838 aa6.73□□□□□ -1.33
SMC4-225ENST00000497203 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
SMC4-225ENST00000497203 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
SMC4-225ENST00000497203 RPS26P11Q5JNZ5 115 aaPredicted RBP6.72□□□□□ -1.33
SMC4-225ENST00000497203 C3orf58Q8NDZ4 430 aa6.72□□□□□ -1.33
SMC4-225ENST00000497203 GIPC2Q8TF65 315 aa6.72□□□□□ -1.33
SMC4-225ENST00000497203 UBL7Q96S82 380 aaPredicted RBP6.72□□□□□ -1.33
SMC4-225ENST00000497203 TRIM56Q9BRZ2 755 aaKnown RBP6.72□□□□□ -1.33
SMC4-225ENST00000497203 PPP4R2Q9NY27 417 aa6.72□□□□□ -1.33
SMC4-225ENST00000497203 PRPF40AO75400 957 aaKnown RBP6.71□□□□□ -1.34
SMC4-225ENST00000497203 CTSBP07858 339 aa6.71□□□□□ -1.34
SMC4-225ENST00000497203 ZNF428Q96B54 188 aa6.71□□□□□ -1.34
SMC4-225ENST00000497203 RUSC1Q9BVN2 902 aa6.71□□□□□ -1.34
SMC4-225ENST00000497203 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
SMC4-225ENST00000497203 ECEL1O95672 775 aa6.7□□□□□ -1.34
SMC4-225ENST00000497203 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
SMC4-225ENST00000497203 ZNF16P17020 682 aaPredicted RBP6.7□□□□□ -1.34
SMC4-225ENST00000497203 MAOBP27338 520 aa6.7□□□□□ -1.34
SMC4-225ENST00000497203 DUSP9Q99956 384 aaKnown RBP6.7□□□□□ -1.34
SMC4-225ENST00000497203 RNF208Q9H0X6 261 aa6.7□□□□□ -1.34
SMC4-225ENST00000497203 SPG7Q9UQ90 795 aa6.7□□□□□ -1.34
SMC4-225ENST00000497203 GIPC1O14908 333 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 HYAL3O43820 417 aaPredicted RBP6.69□□□□□ -1.34
SMC4-225ENST00000497203 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMC4-225ENST00000497203 GSTT1P30711 240 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 PREPP48147 710 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
SMC4-225ENST00000497203 POU4F3Q15319 338 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 TMPRSS13Q9BYE2 586 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 SRCIN1Q9C0H9 1055 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 C12orf49Q9H741 205 aa6.69□□□□□ -1.34
SMC4-225ENST00000497203 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
SMC4-225ENST00000497203 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 EIF4EBP3O60516 100 aaPredicted RBP6.68□□□□□ -1.34
SMC4-225ENST00000497203 CYP11A1P05108 521 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 GNA15P30679 374 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 ITGAEP38570 1179 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 ARMC10Q8N2F6 343 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 DDX54Q8TDD1 881 aaKnown RBP6.68□□□□□ -1.34
SMC4-225ENST00000497203 FAM46AQ96IP4 442 aaKnown RBP6.68□□□□□ -1.34
SMC4-225ENST00000497203 ZFYVE1Q9HBF4 777 aa6.68□□□□□ -1.34
SMC4-225ENST00000497203 USP17L7P0C7H9 530 aa6.67□□□□□ -1.34
SMC4-225ENST00000497203 EXOSC6Q5RKV6 272 aaKnown RBP6.67□□□□□ -1.34
SMC4-225ENST00000497203 NUTM2GQ5VZR2 741 aa6.67□□□□□ -1.34
SMC4-225ENST00000497203 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
SMC4-225ENST00000497203 SMG8Q8ND04 991 aaKnown RBP6.67□□□□□ -1.34
SMC4-225ENST00000497203 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
SMC4-225ENST00000497203 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
SMC4-225ENST00000497203 FBXO24O75426 580 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 TIAF1O95411 115 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 FDX2Q6P4F2 183 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 TPTE2Q6XPS3 522 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 STK35Q8TDR2 534 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 UTP4Q969X6 686 aaKnown RBP6.66□□□□□ -1.34
SMC4-225ENST00000497203 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
SMC4-225ENST00000497203 FRMD6Q96NE9 622 aa6.66□□□□□ -1.34
SMC4-225ENST00000497203 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms