RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 SIL1Q9H173 461 aa15.81■□□□□ 0.12
PPM1F-209ENST00000497072 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
PPM1F-209ENST00000497072 GNL3LQ9NVN8 582 aaKnown RBP15.81■□□□□ 0.12
PPM1F-209ENST00000497072 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
PPM1F-209ENST00000497072 GNAI3P08754 354 aa15.8■□□□□ 0.12
PPM1F-209ENST00000497072 TM4SF4P48230 202 aa15.8■□□□□ 0.12
PPM1F-209ENST00000497072 INHBEP58166 350 aa15.8■□□□□ 0.12
PPM1F-209ENST00000497072 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
PPM1F-209ENST00000497072 NBPF12Q5TAG4 269 aaPredicted RBP15.8■□□□□ 0.12
PPM1F-209ENST00000497072 SUGT1Q9Y2Z0 365 aa15.8■□□□□ 0.12
PPM1F-209ENST00000497072 LRRFIP2Q9Y608 721 aaKnown RBP15.8■□□□□ 0.12
PPM1F-209ENST00000497072 MANSC4A6NHS7 340 aaPredicted RBP15.79■□□□□ 0.12
PPM1F-209ENST00000497072 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 CIAO1O76071 339 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 FGFR2P21802 821 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 RFX5P48382 616 aaPredicted RBP15.79■□□□□ 0.12
PPM1F-209ENST00000497072 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 WDR66Q8TBY9 1149 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 ARAP2Q8WZ64 1704 aa15.79■□□□□ 0.12
PPM1F-209ENST00000497072 ZBTB48P10074 688 aaPredicted RBP15.78■□□□□ 0.12
PPM1F-209ENST00000497072 IL15P40933 162 aaPredicted RBP15.78■□□□□ 0.12
PPM1F-209ENST00000497072 ATP2B3Q16720 1220 aa15.78■□□□□ 0.12
PPM1F-209ENST00000497072 ANKRD13AQ8IZ07 590 aa15.78■□□□□ 0.12
PPM1F-209ENST00000497072 FZD1Q9UP38 647 aa15.78■□□□□ 0.12
PPM1F-209ENST00000497072 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
PPM1F-209ENST00000497072 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
PPM1F-209ENST00000497072 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
PPM1F-209ENST00000497072 CTU1Q7Z7A3 348 aaKnown RBP15.77■□□□□ 0.12
PPM1F-209ENST00000497072 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
PPM1F-209ENST00000497072 HOOK2Q96ED9 719 aa15.77■□□□□ 0.12
PPM1F-209ENST00000497072 WNK4Q96J92 1243 aa15.77■□□□□ 0.12
PPM1F-209ENST00000497072 MRIQ9BWK5 157 aa15.77■□□□□ 0.12
PPM1F-209ENST00000497072 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
PPM1F-209ENST00000497072 ZDHHC15Q96MV8 337 aa15.76■□□□□ 0.11
PPM1F-209ENST00000497072 MEIS3Q99687 375 aa15.76■□□□□ 0.11
PPM1F-209ENST00000497072 AOX1Q06278 1338 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 USP2O75604 605 aaPredicted RBP15.75■□□□□ 0.11
PPM1F-209ENST00000497072 PKN2Q16513 984 aaKnown RBP15.75■□□□□ 0.11
PPM1F-209ENST00000497072 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
PPM1F-209ENST00000497072 HHIPL2Q6UWX4 724 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 CLMNQ96JQ2 1002 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 COPRSQ9NQ92 184 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 DENND2AQ9ULE3 1009 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 CSADQ9Y600 493 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
PPM1F-209ENST00000497072 GPR25O00155 361 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 SEMA3EO15041 775 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 HNRNPUQ00839 825 aaKnown RBP eCLIP15.74■□□□□ 0.11
PPM1F-209ENST00000497072 GRIK5Q16478 980 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 NOM1Q5C9Z4 860 aaKnown RBP15.74■□□□□ 0.11
PPM1F-209ENST00000497072 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
PPM1F-209ENST00000497072 TMEM39BQ9GZU3 492 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
PPM1F-209ENST00000497072 AKAP2Q9Y2D5 859 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 MYH13Q9UKX3 1938 aa15.74■□□□□ 0.11
PPM1F-209ENST00000497072 FKTNO75072 461 aa15.73■□□□□ 0.11
PPM1F-209ENST00000497072 GNAI2P04899 355 aa15.73■□□□□ 0.11
PPM1F-209ENST00000497072 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
PPM1F-209ENST00000497072 FAM83AQ86UY5 434 aa15.73■□□□□ 0.11
PPM1F-209ENST00000497072 IFNL1Q8IU54 200 aa15.73■□□□□ 0.11
PPM1F-209ENST00000497072 ZGPATQ8N5A5 531 aaKnown RBP15.73■□□□□ 0.11
PPM1F-209ENST00000497072 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
PPM1F-209ENST00000497072 BCAR3O75815 825 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 TRIM27P14373 513 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 CACNB3P54284 484 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 MAP3K9P80192 1104 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 MLLT1Q03111 559 aaPredicted RBP15.72■□□□□ 0.11
PPM1F-209ENST00000497072 FKBP1CQ5VVH2 108 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 TEPSINQ96N21 525 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 CFHR5Q9BXR6 569 aa15.72■□□□□ 0.11
PPM1F-209ENST00000497072 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.11
PPM1F-209ENST00000497072 APOBEC3HQ6NTF7 200 aaKnown RBP15.71■□□□□ 0.11
PPM1F-209ENST00000497072 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
PPM1F-209ENST00000497072 MIER1Q8N108 512 aa15.71■□□□□ 0.11
PPM1F-209ENST00000497072 CLUAP1Q96AJ1 413 aa15.71■□□□□ 0.11
PPM1F-209ENST00000497072 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
PPM1F-209ENST00000497072 PHKA1P46020 1223 aa15.7■□□□□ 0.1
PPM1F-209ENST00000497072 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
PPM1F-209ENST00000497072 GORABQ5T7V8 394 aa15.7■□□□□ 0.1
PPM1F-209ENST00000497072 CCDC102BQ68D86 513 aa15.7■□□□□ 0.1
PPM1F-209ENST00000497072 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
PPM1F-209ENST00000497072 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 PRDX5P30044 214 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 GTF2A2P52657 109 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 TIMM10P62072 90 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 G3BP1Q13283 466 aaKnown RBP eCLIP15.69■□□□□ 0.1
PPM1F-209ENST00000497072 MTX1Q13505 466 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 VGLL4Q14135 290 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 SPTY2D1Q68D10 685 aaPredicted RBP15.69■□□□□ 0.1
PPM1F-209ENST00000497072 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
PPM1F-209ENST00000497072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.69■□□□□ 0.1
PPM1F-209ENST00000497072 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 WRNIP1Q96S55 665 aa15.69■□□□□ 0.1
PPM1F-209ENST00000497072 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
PPM1F-209ENST00000497072 RGS19P49795 217 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms