RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 CDAN1Q8IWY9 1227 aa18.82■□□□□ 0.6
NEK4-206ENST00000496822 TBC1D22AQ8WUA7 517 aa18.82■□□□□ 0.6
NEK4-206ENST00000496822 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
NEK4-206ENST00000496822 MAP3K11Q16584 847 aa18.81■□□□□ 0.6
NEK4-206ENST00000496822 ATP2B3Q16720 1220 aa18.81■□□□□ 0.6
NEK4-206ENST00000496822 CLMNQ96JQ2 1002 aa18.81■□□□□ 0.6
NEK4-206ENST00000496822 MCOLN1Q9GZU1 580 aa18.81■□□□□ 0.6
NEK4-206ENST00000496822 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
NEK4-206ENST00000496822 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 ATF7IPQ6VMQ6 1270 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 REM2Q8IYK8 340 aaPredicted RBP18.8■□□□□ 0.6
NEK4-206ENST00000496822 CLUAP1Q96AJ1 413 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
NEK4-206ENST00000496822 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
NEK4-206ENST00000496822 GNAI3P08754 354 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 IL15P40933 162 aaPredicted RBP18.79■□□□□ 0.6
NEK4-206ENST00000496822 CACNB3P54284 484 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 TEPSINQ96N21 525 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 COPRSQ9NQ92 184 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 HDAC5Q9UQL6 1122 aa18.79■□□□□ 0.6
NEK4-206ENST00000496822 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
NEK4-206ENST00000496822 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
NEK4-206ENST00000496822 HDLBPQ00341 1268 aaKnown RBP18.78■□□□□ 0.6
NEK4-206ENST00000496822 DGKZQ13574 1117 aa18.78■□□□□ 0.6
NEK4-206ENST00000496822 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
NEK4-206ENST00000496822 TEKT1Q969V4 418 aa18.78■□□□□ 0.6
NEK4-206ENST00000496822 TMEM39BQ9GZU3 492 aa18.78■□□□□ 0.6
NEK4-206ENST00000496822 OTOFQ9HC10 1997 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 SRGAP3O43295 1099 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
NEK4-206ENST00000496822 TBC1D8O95759 1140 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 ADORA1P30542 326 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 PHKA1P46020 1223 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 TM4SF4P48230 202 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 MTX1Q13505 466 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
NEK4-206ENST00000496822 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
NEK4-206ENST00000496822 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
NEK4-206ENST00000496822 WDR66Q8TBY9 1149 aa18.76■□□□□ 0.59
NEK4-206ENST00000496822 SLC10A4Q96EP9 437 aa18.76■□□□□ 0.59
NEK4-206ENST00000496822 WNK4Q96J92 1243 aa18.76■□□□□ 0.59
NEK4-206ENST00000496822 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
NEK4-206ENST00000496822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
NEK4-206ENST00000496822 MAST3O60307 1309 aa18.75■□□□□ 0.59
NEK4-206ENST00000496822 PRDX5P30044 214 aa18.75■□□□□ 0.59
NEK4-206ENST00000496822 GJA5P36382 358 aa18.75■□□□□ 0.59
NEK4-206ENST00000496822 SREBF2Q12772 1141 aa18.75■□□□□ 0.59
NEK4-206ENST00000496822 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
NEK4-206ENST00000496822 IREB2P48200 963 aaKnown RBP18.74■□□□□ 0.59
NEK4-206ENST00000496822 TFCP2Q12800 502 aa18.74■□□□□ 0.59
NEK4-206ENST00000496822 DIXDC1Q155Q3 683 aa18.74■□□□□ 0.59
NEK4-206ENST00000496822 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
NEK4-206ENST00000496822 MRIQ9BWK5 157 aa18.74■□□□□ 0.59
NEK4-206ENST00000496822 PNMA6EA0A0J9YXQ4 647 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 GNAI2P04899 355 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 ZBTB48P10074 688 aaPredicted RBP18.73■□□□□ 0.59
NEK4-206ENST00000496822 TNNI2P48788 182 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 TIMM10P62072 90 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 CCDC102BQ68D86 513 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 R3HDMLQ9H3Y0 253 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 DAGLAQ9Y4D2 1042 aa18.73■□□□□ 0.59
NEK4-206ENST00000496822 UNCXA6NJT0 531 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 HHIPL2Q6UWX4 724 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 ANKRD13AQ8IZ07 590 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 ZNF296Q8WUU4 475 aaPredicted RBP18.72■□□□□ 0.59
NEK4-206ENST00000496822 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
NEK4-206ENST00000496822 LAMB1P07942 1786 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 ZBED9Q6R2W3 1325 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
NEK4-206ENST00000496822 A0A1B0GUL7 405 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 MANSC4A6NHS7 340 aaPredicted RBP18.71■□□□□ 0.59
NEK4-206ENST00000496822 IGF2BP3O00425 579 aaKnown RBP eCLIP18.71■□□□□ 0.59
NEK4-206ENST00000496822 SEMA3EO15041 775 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 RASGRF1Q13972 1273 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
NEK4-206ENST00000496822 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 TMOD2Q9NZR1 351 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
NEK4-206ENST00000496822 LDHBP07195 334 aaKnown RBP18.7■□□□□ 0.58
NEK4-206ENST00000496822 RLBP1P12271 317 aa18.7■□□□□ 0.58
NEK4-206ENST00000496822 VGLL4Q14135 290 aa18.7■□□□□ 0.58
NEK4-206ENST00000496822 CTU1Q7Z7A3 348 aaKnown RBP18.7■□□□□ 0.58
NEK4-206ENST00000496822 FAM83AQ86UY5 434 aa18.7■□□□□ 0.58
NEK4-206ENST00000496822 IFNL1Q8IU54 200 aa18.7■□□□□ 0.58
NEK4-206ENST00000496822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.7■□□□□ 0.58
NEK4-206ENST00000496822 XAGE2Q96GT9 111 aa18.7■□□□□ 0.58
NEK4-206ENST00000496822 GPR25O00155 361 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 CDC42EP5Q6NZY7 148 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 OPTNQ96CV9 577 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 CFHR5Q9BXR6 569 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 C1orf115Q9H7X2 142 aa18.69■□□□□ 0.58
NEK4-206ENST00000496822 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
NEK4-206ENST00000496822 ZBTB22O15209 634 aa18.68■□□□□ 0.58
NEK4-206ENST00000496822 MAP3K9P80192 1104 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms