RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 SERPINA10Q9UK55 444 aa24.31■■□□□ 1.48
COL20A1-208ENST00000496810 FBXO3Q9UK99 471 aa24.31■■□□□ 1.48
COL20A1-208ENST00000496810 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
COL20A1-208ENST00000496810 CAPN15O75808 1086 aa24.3■■□□□ 1.48
COL20A1-208ENST00000496810 IL15P40933 162 aaPredicted RBP24.3■■□□□ 1.48
COL20A1-208ENST00000496810 DZIP1LQ8IYY4 767 aaKnown RBP24.3■■□□□ 1.48
COL20A1-208ENST00000496810 CEP126Q9P2H0 1117 aa24.3■■□□□ 1.48
COL20A1-208ENST00000496810 LAMB1P07942 1786 aa24.29■■□□□ 1.48
COL20A1-208ENST00000496810 MYO1BO43795 1136 aa24.29■■□□□ 1.48
COL20A1-208ENST00000496810 PHKA1P46020 1223 aa24.29■■□□□ 1.48
COL20A1-208ENST00000496810 ZNF70Q9UC06 446 aaPredicted RBP24.29■■□□□ 1.48
COL20A1-208ENST00000496810 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
COL20A1-208ENST00000496810 GNAI2P04899 355 aa24.28■■□□□ 1.48
COL20A1-208ENST00000496810 NF2P35240 595 aa24.28■■□□□ 1.48
COL20A1-208ENST00000496810 NBPF12Q5TAG4 269 aaPredicted RBP24.28■■□□□ 1.48
COL20A1-208ENST00000496810 TBC1D22AQ8WUA7 517 aa24.28■■□□□ 1.48
COL20A1-208ENST00000496810 C1orf115Q9H7X2 142 aa24.28■■□□□ 1.48
COL20A1-208ENST00000496810 MKRN3Q13064 507 aaKnown RBP24.27■■□□□ 1.48
COL20A1-208ENST00000496810 RASA3Q14644 834 aa24.27■■□□□ 1.48
COL20A1-208ENST00000496810 CSRNP1Q96S65 589 aa24.27■■□□□ 1.48
COL20A1-208ENST00000496810 ANGEL1Q9UNK9 670 aaKnown RBP24.27■■□□□ 1.48
COL20A1-208ENST00000496810 CACNB3P54284 484 aa24.26■■□□□ 1.47
COL20A1-208ENST00000496810 TFCP2Q12800 502 aa24.26■■□□□ 1.47
COL20A1-208ENST00000496810 PPP2R3BQ9Y5P8 575 aa24.26■■□□□ 1.47
COL20A1-208ENST00000496810 MYH2Q9UKX2 1941 aa24.25■■□□□ 1.47
COL20A1-208ENST00000496810 CLMNQ96JQ2 1002 aa24.25■■□□□ 1.47
COL20A1-208ENST00000496810 TCP10L2B9ZVM9 353 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 CA12O43570 354 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 PRDX5P30044 214 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 TIMM10P62072 90 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 LDLRAD1Q5T700 205 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 ARMC9Q7Z3E5 817 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 TEPSINQ96N21 525 aa24.24■■□□□ 1.47
COL20A1-208ENST00000496810 A0A1B0GUL7 405 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 DIXDC1Q155Q3 683 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 CCDC102BQ68D86 513 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 APOBEC3HQ6NTF7 200 aaKnown RBP24.23■■□□□ 1.47
COL20A1-208ENST00000496810 ITPRIPQ8IWB1 547 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 FTSJ3Q8IY81 847 aaKnown RBP24.23■■□□□ 1.47
COL20A1-208ENST00000496810 TMEM39BQ9GZU3 492 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 RNF186Q9NXI6 227 aa24.23■■□□□ 1.47
COL20A1-208ENST00000496810 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.23■■□□□ 1.47
COL20A1-208ENST00000496810 HDLBPQ00341 1268 aaKnown RBP24.22■■□□□ 1.47
COL20A1-208ENST00000496810 ZDHHC15Q96MV8 337 aa24.22■■□□□ 1.47
COL20A1-208ENST00000496810 TRPA1O75762 1119 aa24.21■■□□□ 1.47
COL20A1-208ENST00000496810 RASGRF1Q13972 1273 aa24.21■■□□□ 1.47
COL20A1-208ENST00000496810 WDR66Q8TBY9 1149 aa24.21■■□□□ 1.47
COL20A1-208ENST00000496810 PANK1Q8TE04 598 aa24.21■■□□□ 1.47
COL20A1-208ENST00000496810 MAP3K11Q16584 847 aa24.2■■□□□ 1.46
COL20A1-208ENST00000496810 XAGE2Q96GT9 111 aa24.2■■□□□ 1.46
COL20A1-208ENST00000496810 SUGT1Q9Y2Z0 365 aa24.2■■□□□ 1.46
COL20A1-208ENST00000496810 MAST3O60307 1309 aa24.19■■□□□ 1.46
COL20A1-208ENST00000496810 TNFAIP1Q13829 316 aa24.19■■□□□ 1.46
COL20A1-208ENST00000496810 SAGE1Q9NXZ1 904 aa24.19■■□□□ 1.46
COL20A1-208ENST00000496810 DAGLAQ9Y4D2 1042 aa24.19■■□□□ 1.46
COL20A1-208ENST00000496810 USP2O75604 605 aaPredicted RBP24.18■■□□□ 1.46
COL20A1-208ENST00000496810 POLA2Q14181 598 aa24.18■■□□□ 1.46
COL20A1-208ENST00000496810 SUPT20HL1Q3ZLR7 823 aa24.18■■□□□ 1.46
COL20A1-208ENST00000496810 GNL3LQ9NVN8 582 aaKnown RBP24.18■■□□□ 1.46
COL20A1-208ENST00000496810 MYO5AQ9Y4I1 1855 aaKnown RBP24.17■■□□□ 1.46
COL20A1-208ENST00000496810 SALL1Q9NSC2 1324 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 ZBTB7BO15156 539 aaPredicted RBP24.17■■□□□ 1.46
COL20A1-208ENST00000496810 PPP1R12BO60237 982 aaPredicted RBP24.17■■□□□ 1.46
COL20A1-208ENST00000496810 SPRYD7Q5W111 196 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 HHIPL2Q6UWX4 724 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 PI16Q6UXB8 463 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 DENND2AQ9ULE3 1009 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 AK9Q5TCS8 1911 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 DOCK2Q92608 1830 aa24.17■■□□□ 1.46
COL20A1-208ENST00000496810 SEMA3EO15041 775 aa24.16■■□□□ 1.46
COL20A1-208ENST00000496810 GJA5P36382 358 aa24.16■■□□□ 1.46
COL20A1-208ENST00000496810 SSH3Q8TE77 659 aa24.16■■□□□ 1.46
COL20A1-208ENST00000496810 LDHBP07195 334 aaKnown RBP24.15■■□□□ 1.46
COL20A1-208ENST00000496810 WNK4Q96J92 1243 aa24.15■■□□□ 1.46
COL20A1-208ENST00000496810 NEUROD6Q96NK8 337 aa24.15■■□□□ 1.46
COL20A1-208ENST00000496810 MRIQ9BWK5 157 aa24.15■■□□□ 1.46
COL20A1-208ENST00000496810 ATP8B2P98198 1209 aa24.14■■□□□ 1.45
COL20A1-208ENST00000496810 AKAP2Q9Y2D5 859 aa24.14■■□□□ 1.45
COL20A1-208ENST00000496810 MAST2Q6P0Q8 1798 aa24.14■■□□□ 1.45
COL20A1-208ENST00000496810 HTTP42858 3142 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 IREB2P48200 963 aaKnown RBP24.13■■□□□ 1.45
COL20A1-208ENST00000496810 TNNI2P48788 182 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 NFIAQ12857 509 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 G3BP1Q13283 466 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL20A1-208ENST00000496810 MVPQ14764 893 aaKnown RBP24.13■■□□□ 1.45
COL20A1-208ENST00000496810 CDC42EP5Q6NZY7 148 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 CNKSR2Q8WXI2 1034 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 SLC10A4Q96EP9 437 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 ABHD8Q96I13 439 aa24.13■■□□□ 1.45
COL20A1-208ENST00000496810 PDS5AQ29RF7 1337 aaKnown RBP24.12■■□□□ 1.45
COL20A1-208ENST00000496810 ZBTB22O15209 634 aa24.12■■□□□ 1.45
COL20A1-208ENST00000496810 TM4SF4P48230 202 aa24.12■■□□□ 1.45
COL20A1-208ENST00000496810 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.12■■□□□ 1.45
COL20A1-208ENST00000496810 ELP3Q9H9T3 547 aa24.12■■□□□ 1.45
COL20A1-208ENST00000496810 TMOD2Q9NZR1 351 aa24.12■■□□□ 1.45
COL20A1-208ENST00000496810 RPAP1Q9BWH6 1393 aaPredicted RBP24.12■■□□□ 1.45
COL20A1-208ENST00000496810 TBC1D8O95759 1140 aa24.11■■□□□ 1.45
COL20A1-208ENST00000496810 CEP85Q6P2H3 762 aa24.11■■□□□ 1.45
COL20A1-208ENST00000496810 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms