RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 MKRN3Q13064 507 aaKnown RBP15.48■□□□□ 0.07
VPS72-206ENST00000496809 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
VPS72-206ENST00000496809 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
VPS72-206ENST00000496809 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 SLC5A1P13866 664 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 CHAF1AQ13111 956 aaPredicted RBP15.47■□□□□ 0.07
VPS72-206ENST00000496809 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
VPS72-206ENST00000496809 OTUD7BQ6GQQ9 843 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 KLHDC4Q8TBB5 520 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 LPIN2Q92539 896 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 TEKT1Q969V4 418 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 TDRD3Q9H7E2 651 aaKnown RBP15.47■□□□□ 0.07
VPS72-206ENST00000496809 TMOD2Q9NZR1 351 aa15.47■□□□□ 0.07
VPS72-206ENST00000496809 IQSEC3Q9UPP2 1182 aaPredicted RBP15.47■□□□□ 0.07
VPS72-206ENST00000496809 GPR25O00155 361 aa15.46■□□□□ 0.07
VPS72-206ENST00000496809 BCAMP50895 628 aa15.46■□□□□ 0.07
VPS72-206ENST00000496809 ZNF296Q8WUU4 475 aaPredicted RBP15.46■□□□□ 0.07
VPS72-206ENST00000496809 HOOK2Q96ED9 719 aa15.46■□□□□ 0.07
VPS72-206ENST00000496809 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
VPS72-206ENST00000496809 FKTNO75072 461 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 USP2O75604 605 aaPredicted RBP15.45■□□□□ 0.06
VPS72-206ENST00000496809 CIAO1O76071 339 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 FGFR2P21802 821 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 WNK4Q96J92 1243 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
VPS72-206ENST00000496809 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 FZD1Q9UP38 647 aa15.45■□□□□ 0.06
VPS72-206ENST00000496809 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
VPS72-206ENST00000496809 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
VPS72-206ENST00000496809 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
VPS72-206ENST00000496809 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
VPS72-206ENST00000496809 ZDHHC15Q96MV8 337 aa15.44■□□□□ 0.06
VPS72-206ENST00000496809 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
VPS72-206ENST00000496809 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
VPS72-206ENST00000496809 IPO8O15397 1037 aaKnown RBP15.43■□□□□ 0.06
VPS72-206ENST00000496809 FKBP1CQ5VVH2 108 aa15.43■□□□□ 0.06
VPS72-206ENST00000496809 HHIPL2Q6UWX4 724 aa15.43■□□□□ 0.06
VPS72-206ENST00000496809 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
VPS72-206ENST00000496809 AOX1Q06278 1338 aa15.43■□□□□ 0.06
VPS72-206ENST00000496809 GNAI3P08754 354 aa15.42■□□□□ 0.06
VPS72-206ENST00000496809 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
VPS72-206ENST00000496809 RARSP54136 660 aaKnown RBP15.42■□□□□ 0.06
VPS72-206ENST00000496809 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
VPS72-206ENST00000496809 FAM83AQ86UY5 434 aa15.42■□□□□ 0.06
VPS72-206ENST00000496809 TEPSINQ96N21 525 aa15.42■□□□□ 0.06
VPS72-206ENST00000496809 CSADQ9Y600 493 aa15.42■□□□□ 0.06
VPS72-206ENST00000496809 SEMA3EO15041 775 aa15.41■□□□□ 0.06
VPS72-206ENST00000496809 MAP3K9P80192 1104 aa15.41■□□□□ 0.06
VPS72-206ENST00000496809 ATP2B3Q16720 1220 aa15.41■□□□□ 0.06
VPS72-206ENST00000496809 TMEM39BQ9GZU3 492 aa15.41■□□□□ 0.06
VPS72-206ENST00000496809 SIL1Q9H173 461 aa15.41■□□□□ 0.06
VPS72-206ENST00000496809 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
VPS72-206ENST00000496809 GRIK5Q16478 980 aa15.4■□□□□ 0.06
VPS72-206ENST00000496809 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
VPS72-206ENST00000496809 FBXO46Q6PJ61 603 aaPredicted RBP15.4■□□□□ 0.06
VPS72-206ENST00000496809 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
VPS72-206ENST00000496809 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
VPS72-206ENST00000496809 COPRSQ9NQ92 184 aa15.4■□□□□ 0.06
VPS72-206ENST00000496809 HPS5Q9UPZ3 1129 aa15.4■□□□□ 0.06
VPS72-206ENST00000496809 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
VPS72-206ENST00000496809 TESPA1A2RU30 521 aaPredicted RBP15.39■□□□□ 0.05
VPS72-206ENST00000496809 GTF2A2P52657 109 aa15.39■□□□□ 0.05
VPS72-206ENST00000496809 DCAF15Q66K64 600 aa15.39■□□□□ 0.05
VPS72-206ENST00000496809 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
VPS72-206ENST00000496809 ZGPATQ8N5A5 531 aaKnown RBP15.39■□□□□ 0.05
VPS72-206ENST00000496809 DENND2AQ9ULE3 1009 aa15.39■□□□□ 0.05
VPS72-206ENST00000496809 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS72-206ENST00000496809 ZBTB22O15209 634 aa15.38■□□□□ 0.05
VPS72-206ENST00000496809 LDHBP07195 334 aaKnown RBP15.38■□□□□ 0.05
VPS72-206ENST00000496809 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
VPS72-206ENST00000496809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS72-206ENST00000496809 ERO1AQ96HE7 468 aa15.38■□□□□ 0.05
VPS72-206ENST00000496809 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
VPS72-206ENST00000496809 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
VPS72-206ENST00000496809 CACNB3P54284 484 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 VGLL4Q14135 290 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 ARHGEF6Q15052 776 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 MEIS3Q99687 375 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
VPS72-206ENST00000496809 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 GJA5P36382 358 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 SOX10P56693 466 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 CRHR2Q13324 411 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 MTX1Q13505 466 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 WRNIP1Q96S55 665 aa15.36■□□□□ 0.05
VPS72-206ENST00000496809 LAMB1P07942 1786 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 SPDYE5A6NIY4 337 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 CETPP11597 493 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
VPS72-206ENST00000496809 CCDC102BQ68D86 513 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 CDAN1Q8IWY9 1227 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 OTUD5Q96G74 571 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 MS4A4AQ96JQ5 239 aa15.35■□□□□ 0.05
VPS72-206ENST00000496809 PTPN18Q99952 460 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms