RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 SPDYE6P0CI01 402 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 CFAP100Q494V2 611 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 PANK1Q8TE04 598 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 ZBED3Q96IU2 234 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-214ENST00000496633 ZNF512BQ96KM6 892 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-214ENST00000496633 NEUROD6Q96NK8 337 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 GBA2Q9HCG7 927 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-214ENST00000496633 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
CDHR3-214ENST00000496633 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
CDHR3-214ENST00000496633 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CA12O43570 354 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
CDHR3-214ENST00000496633 RLBP1P12271 317 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CRKP46108 304 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 GSTO1P78417 241 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 TFCP2Q12800 502 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CHAF1AQ13111 956 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-214ENST00000496633 NOGQ13253 232 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 NBPF9Q3BBW0 867 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CST9Q5W186 159 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CEP85Q6P2H3 762 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 CERS3Q8IU89 383 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 KIF1BPQ96EK5 621 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 ZDHHC15Q96MV8 337 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 ZNF408Q9H9D4 720 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 ZNF646O15015 1829 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-214ENST00000496633 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
CDHR3-214ENST00000496633 SHTN1A0MZ66 631 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 F8W031 263 aaPredicted RBP9.32□□□□□ -0.92
CDHR3-214ENST00000496633 TRAF5O00463 557 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 EGFRP00533 1210 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 LDHCP07864 332 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 HUNKP57058 714 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 TNNI3KQ59H18 835 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
CDHR3-214ENST00000496633 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
CDHR3-214ENST00000496633 CERS5Q8N5B7 392 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 CDCA5Q96FF9 252 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
CDHR3-214ENST00000496633 TNNQ9UQP3 1299 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 COG6Q9Y2V7 657 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 FPGT-TNNI3KV9GXZ4 949 aa9.32□□□□□ -0.92
CDHR3-214ENST00000496633 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
CDHR3-214ENST00000496633 ARID4AP29374 1257 aaPredicted RBP9.31□□□□□ -0.92
CDHR3-214ENST00000496633 TIMM10P62072 90 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
CDHR3-214ENST00000496633 TTC39AQ5SRH9 613 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 RGMBQ6NW40 437 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 FAM83AQ86UY5 434 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
CDHR3-214ENST00000496633 CAPNS2Q96L46 248 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 NOL10Q9BSC4 688 aaKnown RBP9.31□□□□□ -0.92
CDHR3-214ENST00000496633 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 PAPPA2Q9BXP8 1791 aa9.31□□□□□ -0.92
CDHR3-214ENST00000496633 POLR2AP24928 1970 aaKnown RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 ADM5C9JUS6 153 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 PHKA1P46020 1223 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 IREB2P48200 963 aaKnown RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 VEGFBP49765 207 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 TTF1Q15361 905 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 SPATA5Q8NB90 893 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 PRMT6Q96LA8 375 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 VEZTQ9HBM0 779 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 IQSEC3Q9UPP2 1182 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-214ENST00000496633 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 PCNTO95613 3336 aa9.3□□□□□ -0.92
CDHR3-214ENST00000496633 BAG3O95817 575 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 PLCG2P16885 1265 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 ZNF157P51786 506 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-214ENST00000496633 RRP1P56182 461 aaKnown RBP9.29□□□□□ -0.92
CDHR3-214ENST00000496633 INHBEP58166 350 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 HTRA3P83110 453 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDHR3-214ENST00000496633 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
CDHR3-214ENST00000496633 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 LRP2BPQ9P2M1 347 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 ZNF70Q9UC06 446 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-214ENST00000496633 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 JAG2Q9Y219 1238 aa9.29□□□□□ -0.92
CDHR3-214ENST00000496633 RPAP1Q9BWH6 1393 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-214ENST00000496633 IFIT2P09913 472 aaKnown RBP9.28□□□□□ -0.92
CDHR3-214ENST00000496633 RASA3Q14644 834 aa9.28□□□□□ -0.92
CDHR3-214ENST00000496633 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
CDHR3-214ENST00000496633 RHPN1Q8TCX5 695 aa9.28□□□□□ -0.92
CDHR3-214ENST00000496633 GPATCH3Q96I76 525 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms