RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 DPF2Q92785 391 aa22.26■■□□□ 1.15
TSSC4-210ENST00000496468 HDAC9Q9UKV0 1011 aa22.26■■□□□ 1.15
TSSC4-210ENST00000496468 TTF2Q9UNY4 1162 aaKnown RBP22.26■■□□□ 1.15
TSSC4-210ENST00000496468 TRIM6-TRIM34B2RNG4 842 aa22.25■■□□□ 1.15
TSSC4-210ENST00000496468 USP17L8P0C7I0 530 aa22.25■■□□□ 1.15
TSSC4-210ENST00000496468 GSPT1P15170 499 aaKnown RBP22.25■■□□□ 1.15
TSSC4-210ENST00000496468 MICALL2Q8IY33 904 aa22.25■■□□□ 1.15
TSSC4-210ENST00000496468 CNTROBQ8N137 903 aa22.25■■□□□ 1.15
TSSC4-210ENST00000496468 OGFOD1Q8N543 542 aa22.25■■□□□ 1.15
TSSC4-210ENST00000496468 MAP3K12Q12852 859 aa22.24■■□□□ 1.15
TSSC4-210ENST00000496468 KBTBD3Q8NAB2 608 aa22.24■■□□□ 1.15
TSSC4-210ENST00000496468 EVI5LQ96CN4 794 aa22.24■■□□□ 1.15
TSSC4-210ENST00000496468 FSD1Q9BTV5 496 aa22.24■■□□□ 1.15
TSSC4-210ENST00000496468 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.24■■□□□ 1.15
TSSC4-210ENST00000496468 GPRC5DQ9NZD1 345 aa22.24■■□□□ 1.15
TSSC4-210ENST00000496468 IGSF3O75054 1194 aa22.23■■□□□ 1.15
TSSC4-210ENST00000496468 MECOMQ03112 1051 aa22.23■■□□□ 1.15
TSSC4-210ENST00000496468 MYH2Q9UKX2 1941 aa22.23■■□□□ 1.15
TSSC4-210ENST00000496468 RFX7Q2KHR2 1363 aa22.23■■□□□ 1.15
TSSC4-210ENST00000496468 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
TSSC4-210ENST00000496468 MMP14P50281 582 aa22.22■■□□□ 1.15
TSSC4-210ENST00000496468 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
TSSC4-210ENST00000496468 RILPL2Q969X0 211 aa22.22■■□□□ 1.15
TSSC4-210ENST00000496468 CNOT7Q9UIV1 285 aaKnown RBP22.22■■□□□ 1.15
TSSC4-210ENST00000496468 SHTN1A0MZ66 631 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 H7C1D1 291 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 ZNF280AP59817 542 aaPredicted RBP22.21■■□□□ 1.15
TSSC4-210ENST00000496468 GSTO1P78417 241 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
TSSC4-210ENST00000496468 NAA16Q6N069 864 aaPredicted RBP22.21■■□□□ 1.15
TSSC4-210ENST00000496468 SLF2Q8IX21 1173 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 TEKT1Q969V4 418 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 NSUN4Q96CB9 384 aaKnown RBP22.21■■□□□ 1.15
TSSC4-210ENST00000496468 HACL1Q9UJ83 578 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 SERPINA10Q9UK55 444 aa22.21■■□□□ 1.15
TSSC4-210ENST00000496468 PDE6AP16499 860 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 CRKP46108 304 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 HDLBPQ00341 1268 aaKnown RBP22.2■■□□□ 1.14
TSSC4-210ENST00000496468 DIXDC1Q155Q3 683 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 ZSCAN25Q6NSZ9 544 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 MAGEB6Q8N7X4 407 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 MROH7-TTC4A0A0A0MT08 1334 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 ECM29Q5VYK3 1845 aa22.2■■□□□ 1.14
TSSC4-210ENST00000496468 EPS15P42566 896 aa22.19■■□□□ 1.14
TSSC4-210ENST00000496468 RBM5P52756 815 aaKnown RBP eCLIP22.19■■□□□ 1.14
TSSC4-210ENST00000496468 KIF4BQ2VIQ3 1234 aa22.19■■□□□ 1.14
TSSC4-210ENST00000496468 BMP2KLQ5H9B9 411 aa22.19■■□□□ 1.14
TSSC4-210ENST00000496468 SLC9C2Q5TAH2 1124 aa22.19■■□□□ 1.14
TSSC4-210ENST00000496468 TMED8Q6PL24 325 aaPredicted RBP22.19■■□□□ 1.14
TSSC4-210ENST00000496468 MYOZ2Q9NPC6 264 aa22.19■■□□□ 1.14
TSSC4-210ENST00000496468 GAKO14976 1311 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 SDSP20132 328 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 YY1P25490 414 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 ADD2P35612 726 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 CFAP100Q494V2 611 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 ZNF384Q8TF68 577 aa22.18■■□□□ 1.14
TSSC4-210ENST00000496468 ADARB2Q9NS39 739 aaKnown RBP22.18■■□□□ 1.14
TSSC4-210ENST00000496468 ZNF532Q9HCE3 1301 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 ZFYP08048 801 aaPredicted RBP22.17■■□□□ 1.14
TSSC4-210ENST00000496468 CYP7A1P22680 504 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 EPHX2P34913 555 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 DLGAP5Q15398 846 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 HHIPL2Q6UWX4 724 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 TRPM4Q8TD43 1214 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 DAGLAQ9Y4D2 1042 aa22.17■■□□□ 1.14
TSSC4-210ENST00000496468 LDHCP07864 332 aa22.16■■□□□ 1.14
TSSC4-210ENST00000496468 TBC1D10BQ4KMP7 808 aaPredicted RBP22.16■■□□□ 1.14
TSSC4-210ENST00000496468 SAMD7Q7Z3H4 446 aa22.16■■□□□ 1.14
TSSC4-210ENST00000496468 ZDHHC15Q96MV8 337 aa22.16■■□□□ 1.14
TSSC4-210ENST00000496468 NOL10Q9BSC4 688 aaKnown RBP22.16■■□□□ 1.14
TSSC4-210ENST00000496468 TCRBV5S4A2TA0A5A2 114 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 SPDYE2BA6NHP3 402 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 EGFRP00533 1210 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 SPDYE6P0CI01 402 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 UBE3CQ15386 1083 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 RBM26Q5T8P6 1007 aaKnown RBP22.15■■□□□ 1.14
TSSC4-210ENST00000496468 MTMR14Q8NCE2 650 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 MRIQ9BWK5 157 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 TAF1DQ9H5J8 278 aaPredicted RBP22.15■■□□□ 1.14
TSSC4-210ENST00000496468 NMRK2Q9NPI5 230 aa22.15■■□□□ 1.14
TSSC4-210ENST00000496468 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
TSSC4-210ENST00000496468 VEGFAP15692 232 aaPredicted RBP22.14■■□□□ 1.13
TSSC4-210ENST00000496468 BTDP43251 543 aa22.14■■□□□ 1.13
TSSC4-210ENST00000496468 ADGRA1Q86SQ6 560 aa22.14■■□□□ 1.13
TSSC4-210ENST00000496468 TICAM2Q86XR7 235 aa22.14■■□□□ 1.13
TSSC4-210ENST00000496468 FAM163AQ96GL9 167 aaPredicted RBP22.14■■□□□ 1.13
TSSC4-210ENST00000496468 RRAGCQ9HB90 399 aa22.14■■□□□ 1.13
TSSC4-210ENST00000496468 GPBP1L1Q9HC44 474 aaPredicted RBP22.14■■□□□ 1.13
TSSC4-210ENST00000496468 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.13
TSSC4-210ENST00000496468 POTECB2RU33 542 aa22.13■■□□□ 1.13
TSSC4-210ENST00000496468 HIP1O00291 1037 aa22.13■■□□□ 1.13
TSSC4-210ENST00000496468 CHGBP05060 677 aa22.13■■□□□ 1.13
TSSC4-210ENST00000496468 USP50Q70EL3 339 aaPredicted RBP22.13■■□□□ 1.13
TSSC4-210ENST00000496468 APPBP2Q92624 585 aa22.13■■□□□ 1.13
TSSC4-210ENST00000496468 DIAPH3Q9NSV4 1193 aa22.13■■□□□ 1.13
TSSC4-210ENST00000496468 WNT10BO00744 389 aa22.12■■□□□ 1.13
TSSC4-210ENST00000496468 MYO1BO43795 1136 aa22.12■■□□□ 1.13
TSSC4-210ENST00000496468 SLFNL1Q499Z3 407 aa22.12■■□□□ 1.13
TSSC4-210ENST00000496468 EAPPQ56P03 285 aaPredicted RBP22.12■■□□□ 1.13
TSSC4-210ENST00000496468 MIGA1Q8NAN2 632 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms