RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZBTB22O15209 634 aa19.53■□□□□ 0.72
HDAC4-213ENST00000496347 CRKP46108 304 aa19.53■□□□□ 0.72
HDAC4-213ENST00000496347 ZIC5Q96T25 663 aa19.53■□□□□ 0.72
HDAC4-213ENST00000496347 VEZTQ9HBM0 779 aa19.53■□□□□ 0.72
HDAC4-213ENST00000496347 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
HDAC4-213ENST00000496347 AOX1Q06278 1338 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 SEMA3EO15041 775 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 MOB2Q70IA6 237 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 DZIP1LQ8IYY4 767 aaKnown RBP19.52■□□□□ 0.72
HDAC4-213ENST00000496347 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 WDR66Q8TBY9 1149 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 GNL3LQ9NVN8 582 aaKnown RBP19.52■□□□□ 0.72
HDAC4-213ENST00000496347 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
HDAC4-213ENST00000496347 KIF23Q02241 960 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-213ENST00000496347 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
HDAC4-213ENST00000496347 UBE2Q2LH0YL09 131 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 GRIK5Q16478 980 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 MAP3K11Q16584 847 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 ZDHHC15Q96MV8 337 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 MRIQ9BWK5 157 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-213ENST00000496347 CASP8AP2Q9UKL3 1982 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 PDS5AQ29RF7 1337 aaKnown RBP19.5■□□□□ 0.71
HDAC4-213ENST00000496347 SALL1Q9NSC2 1324 aa19.5■□□□□ 0.71
HDAC4-213ENST00000496347 UNCXA6NJT0 531 aa19.49■□□□□ 0.71
HDAC4-213ENST00000496347 PPP1R12BO60237 982 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-213ENST00000496347 RASA3Q14644 834 aa19.49■□□□□ 0.71
HDAC4-213ENST00000496347 LDLRAD1Q5T700 205 aa19.49■□□□□ 0.71
HDAC4-213ENST00000496347 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
HDAC4-213ENST00000496347 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-213ENST00000496347 TNNI2P48788 182 aa19.48■□□□□ 0.71
HDAC4-213ENST00000496347 HHIPL2Q6UWX4 724 aa19.48■□□□□ 0.71
HDAC4-213ENST00000496347 TDRD3Q9H7E2 651 aaKnown RBP19.48■□□□□ 0.71
HDAC4-213ENST00000496347 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
HDAC4-213ENST00000496347 DENND2AQ9ULE3 1009 aa19.48■□□□□ 0.71
HDAC4-213ENST00000496347 ANGEL1Q9UNK9 670 aaKnown RBP19.48■□□□□ 0.71
HDAC4-213ENST00000496347 PHKA1P46020 1223 aa19.47■□□□□ 0.71
HDAC4-213ENST00000496347 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
HDAC4-213ENST00000496347 TMOD2Q9NZR1 351 aa19.47■□□□□ 0.71
HDAC4-213ENST00000496347 MYH2Q9UKX2 1941 aa19.47■□□□□ 0.71
HDAC4-213ENST00000496347 PNMA6EA0A0J9YXQ4 647 aa19.46■□□□□ 0.71
HDAC4-213ENST00000496347 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
HDAC4-213ENST00000496347 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
HDAC4-213ENST00000496347 FKBP1CQ5VVH2 108 aa19.46■□□□□ 0.71
HDAC4-213ENST00000496347 CCDC102BQ68D86 513 aa19.46■□□□□ 0.71
HDAC4-213ENST00000496347 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
HDAC4-213ENST00000496347 CSRNP1Q96S65 589 aa19.46■□□□□ 0.71
HDAC4-213ENST00000496347 RLBP1P12271 317 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 ADORA1P30542 326 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 IREB2P48200 963 aaKnown RBP19.45■□□□□ 0.7
HDAC4-213ENST00000496347 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 TFCP2Q12800 502 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 PRKG1Q13976 671 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 NBPF12Q5TAG4 269 aaPredicted RBP19.45■□□□□ 0.7
HDAC4-213ENST00000496347 TEPSINQ96N21 525 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 RNF186Q9NXI6 227 aa19.45■□□□□ 0.7
HDAC4-213ENST00000496347 MAST2Q6P0Q8 1798 aa19.44■□□□□ 0.7
HDAC4-213ENST00000496347 LDHBP07195 334 aaKnown RBP19.44■□□□□ 0.7
HDAC4-213ENST00000496347 ZBTB48P10074 688 aaPredicted RBP19.44■□□□□ 0.7
HDAC4-213ENST00000496347 RASGRF1Q13972 1273 aa19.44■□□□□ 0.7
HDAC4-213ENST00000496347 POLA2Q14181 598 aa19.44■□□□□ 0.7
HDAC4-213ENST00000496347 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
HDAC4-213ENST00000496347 FAM83AQ86UY5 434 aa19.44■□□□□ 0.7
HDAC4-213ENST00000496347 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
HDAC4-213ENST00000496347 PRDX5P30044 214 aa19.43■□□□□ 0.7
HDAC4-213ENST00000496347 SPRYD7Q5W111 196 aa19.43■□□□□ 0.7
HDAC4-213ENST00000496347 XAGE2Q96GT9 111 aa19.43■□□□□ 0.7
HDAC4-213ENST00000496347 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
HDAC4-213ENST00000496347 DOCK2Q92608 1830 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 TRPA1O75762 1119 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 MS4A1P11836 297 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 G3BP1Q13283 466 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDAC4-213ENST00000496347 ANKRD13AQ8IZ07 590 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 SSH3Q8TE77 659 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 HOOK2Q96ED9 719 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 DAGLAQ9Y4D2 1042 aa19.42■□□□□ 0.7
HDAC4-213ENST00000496347 TIMM10P62072 90 aa19.41■□□□□ 0.7
HDAC4-213ENST00000496347 ZBTB7BO15156 539 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-213ENST00000496347 TM4SF4P48230 202 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 CACNB3P54284 484 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 DIXDC1Q155Q3 683 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 CDAN1Q8IWY9 1227 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 SLC10A4Q96EP9 437 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 WNK4Q96J92 1243 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 CLMNQ96JQ2 1002 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 C1orf115Q9H7X2 142 aa19.4■□□□□ 0.7
HDAC4-213ENST00000496347 MANSC4A6NHS7 340 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-213ENST00000496347 USP2O75604 605 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-213ENST00000496347 CAPN15O75808 1086 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 ATP8B2P98198 1209 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
HDAC4-213ENST00000496347 DZIP1Q86YF9 867 aaKnown RBP19.39■□□□□ 0.69
HDAC4-213ENST00000496347 GPR108Q9NPR9 543 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-213ENST00000496347 GAKO14976 1311 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 RFX7Q2KHR2 1363 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 AK9Q5TCS8 1911 aa19.39■□□□□ 0.69
HDAC4-213ENST00000496347 ARID4AP29374 1257 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms