RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
SF3A1-209ENST00000496189 GBA2Q9HCG7 927 aaPredicted RBP20.11■□□□□ 0.81
SF3A1-209ENST00000496189 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
SF3A1-209ENST00000496189 TLL2Q9Y6L7 1015 aa20.11■□□□□ 0.81
SF3A1-209ENST00000496189 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
SF3A1-209ENST00000496189 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 SALL1Q9NSC2 1324 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 RASSF10A6NK89 507 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 ZBTB22O15209 634 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
SF3A1-209ENST00000496189 MRIQ9BWK5 157 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 PPP2R3BQ9Y5P8 575 aa20.1■□□□□ 0.81
SF3A1-209ENST00000496189 POLR2AP24928 1970 aaKnown RBP20.09■□□□□ 0.81
SF3A1-209ENST00000496189 TNNI2P48788 182 aa20.09■□□□□ 0.81
SF3A1-209ENST00000496189 AAMPQ13685 434 aa20.09■□□□□ 0.81
SF3A1-209ENST00000496189 RASGRF1Q13972 1273 aa20.09■□□□□ 0.81
SF3A1-209ENST00000496189 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
SF3A1-209ENST00000496189 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
SF3A1-209ENST00000496189 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
SF3A1-209ENST00000496189 CLRN2A0PK11 232 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 RAB11FIP3O75154 756 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 HUNKP57058 714 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 FKBP1BP68106 108 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 SAPCD2Q86UD0 394 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 DZIP1Q86YF9 867 aaKnown RBP20.08■□□□□ 0.81
SF3A1-209ENST00000496189 CLASRPQ8N2M8 674 aaKnown RBP20.08■□□□□ 0.81
SF3A1-209ENST00000496189 KIF1BPQ96EK5 621 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 HHIPL1Q96JK4 782 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 CRBNQ96SW2 442 aa20.08■□□□□ 0.81
SF3A1-209ENST00000496189 APBB1O00213 710 aa20.07■□□□□ 0.8
SF3A1-209ENST00000496189 ARID4AP29374 1257 aaPredicted RBP20.07■□□□□ 0.8
SF3A1-209ENST00000496189 GRM1Q13255 1194 aa20.07■□□□□ 0.8
SF3A1-209ENST00000496189 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
SF3A1-209ENST00000496189 HHIPL2Q6UWX4 724 aa20.07■□□□□ 0.8
SF3A1-209ENST00000496189 SPATA5Q8NB90 893 aa20.07■□□□□ 0.8
SF3A1-209ENST00000496189 DEFB129Q9H1M3 183 aa20.07■□□□□ 0.8
SF3A1-209ENST00000496189 JMYQ8N9B5 988 aa20.06■□□□□ 0.8
SF3A1-209ENST00000496189 RHPN1Q8TCX5 695 aa20.06■□□□□ 0.8
SF3A1-209ENST00000496189 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
SF3A1-209ENST00000496189 TDRD3Q9H7E2 651 aaKnown RBP20.06■□□□□ 0.8
SF3A1-209ENST00000496189 ZNF70Q9UC06 446 aaPredicted RBP20.06■□□□□ 0.8
SF3A1-209ENST00000496189 SCAF8Q9UPN6 1271 aaKnown RBP20.06■□□□□ 0.8
SF3A1-209ENST00000496189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.06■□□□□ 0.8
SF3A1-209ENST00000496189 PRDX5P30044 214 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 VEGFBP49765 207 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 GRIK5Q16478 980 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 SUPT20HL1Q3ZLR7 823 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 DLK2Q6UY11 383 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 AACSQ86V21 672 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 DBNDD2Q9BQY9 259 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 PCDHAC2Q9Y5I4 1007 aa20.05■□□□□ 0.8
SF3A1-209ENST00000496189 WDR33Q9C0J8 1336 aaKnown RBP20.04■□□□□ 0.8
SF3A1-209ENST00000496189 CENPBP07199 599 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-209ENST00000496189 IFIT2P09913 472 aaKnown RBP20.04■□□□□ 0.8
SF3A1-209ENST00000496189 ARMC9Q7Z3E5 817 aa20.04■□□□□ 0.8
SF3A1-209ENST00000496189 CAPNS2Q96L46 248 aa20.04■□□□□ 0.8
SF3A1-209ENST00000496189 CCDC8Q9H0W5 538 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-209ENST00000496189 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
SF3A1-209ENST00000496189 GSTO1P78417 241 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 PRAMEF18Q5VWM3 479 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 SIRT2Q8IXJ6 389 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 EAF2Q96CJ1 260 aaPredicted RBP20.03■□□□□ 0.8
SF3A1-209ENST00000496189 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 IL1RAPL2Q9NP60 686 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 LRP2BPQ9P2M1 347 aa20.03■□□□□ 0.8
SF3A1-209ENST00000496189 TCP10L2B9ZVM9 353 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 PPP1R12BO60237 982 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-209ENST00000496189 LDHCP07864 332 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 MCAMP43121 646 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 RASA3Q14644 834 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 RGMBQ6NW40 437 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 ZNF512BQ96KM6 892 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-209ENST00000496189 NOL10Q9BSC4 688 aaKnown RBP20.02■□□□□ 0.8
SF3A1-209ENST00000496189 DBNLQ9UJU6 430 aaKnown RBP20.02■□□□□ 0.8
SF3A1-209ENST00000496189 PAPPA2Q9BXP8 1791 aa20.02■□□□□ 0.8
SF3A1-209ENST00000496189 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
SF3A1-209ENST00000496189 DIXDC1Q155Q3 683 aa20.01■□□□□ 0.79
SF3A1-209ENST00000496189 CCDC102AQ96A19 550 aa20.01■□□□□ 0.79
SF3A1-209ENST00000496189 HOOK2Q96ED9 719 aa20.01■□□□□ 0.79
SF3A1-209ENST00000496189 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
SF3A1-209ENST00000496189 LRRCC1Q9C099 1032 aa20.01■□□□□ 0.79
SF3A1-209ENST00000496189 IGSF3O75054 1194 aa20■□□□□ 0.79
SF3A1-209ENST00000496189 MAP2K1Q02750 393 aaPredicted RBP20■□□□□ 0.79
SF3A1-209ENST00000496189 FKBP1CQ5VVH2 108 aa20■□□□□ 0.79
SF3A1-209ENST00000496189 AIDAQ96BJ3 306 aa20■□□□□ 0.79
SF3A1-209ENST00000496189 ZBTB47Q9UFB7 747 aaPredicted RBP20■□□□□ 0.79
SF3A1-209ENST00000496189 DAGLAQ9Y4D2 1042 aa20■□□□□ 0.79
SF3A1-209ENST00000496189 NOGQ13253 232 aa19.99■□□□□ 0.79
SF3A1-209ENST00000496189 PRKG1Q13976 671 aa19.99■□□□□ 0.79
SF3A1-209ENST00000496189 APOBEC3HQ6NTF7 200 aaKnown RBP19.99■□□□□ 0.79
SF3A1-209ENST00000496189 PI16Q6UXB8 463 aa19.99■□□□□ 0.79
SF3A1-209ENST00000496189 SNRKQ9NRH2 765 aa19.99■□□□□ 0.79
SF3A1-209ENST00000496189 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
SF3A1-209ENST00000496189 MAP2K2P36507 400 aa19.98■□□□□ 0.79
SF3A1-209ENST00000496189 MECOMQ03112 1051 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms