RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 KLRG2A4D1S0 409 aaPredicted RBP10.24□□□□□ -0.77
VPS13B-206ENST00000496144 OSBPP22059 807 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
VPS13B-206ENST00000496144 ZNF341Q9BYN7 854 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 USP44Q9H0E7 712 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 SLKQ9H2G2 1235 aaPredicted RBP10.24□□□□□ -0.77
VPS13B-206ENST00000496144 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 AOX1Q06278 1338 aa10.24□□□□□ -0.77
VPS13B-206ENST00000496144 SLC3A2P08195 630 aaKnown RBP10.23□□□□□ -0.77
VPS13B-206ENST00000496144 USP5P45974 858 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 MINPP1Q9UNW1 487 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 KIF23Q02241 960 aaPredicted RBP10.23□□□□□ -0.77
VPS13B-206ENST00000496144 SMCR8Q8TEV9 937 aaPredicted RBP10.23□□□□□ -0.77
VPS13B-206ENST00000496144 FEZ1Q99689 392 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 TRPA1O75762 1119 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 GLRX3O76003 335 aaKnown RBP10.23□□□□□ -0.77
VPS13B-206ENST00000496144 GTF2A2P52657 109 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
VPS13B-206ENST00000496144 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 SEMA3EO15041 775 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 RAD21O60216 631 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 PDE1AP54750 535 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 ANKRD13AQ8IZ07 590 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 ZNF831Q5JPB2 1677 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 USP26Q9BXU7 913 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 TAF5LO75529 589 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 SASH1O94885 1247 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 VIL1P09327 827 aaKnown RBP10.22□□□□□ -0.77
VPS13B-206ENST00000496144 CETPP11597 493 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 LPIN2Q92539 896 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 HTRA3P83110 453 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 CTU1Q7Z7A3 348 aaKnown RBP10.22□□□□□ -0.77
VPS13B-206ENST00000496144 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 SSH3Q8TE77 659 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 TNRC6CQ9HCJ0 1690 aaKnown RBP10.22□□□□□ -0.77
VPS13B-206ENST00000496144 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
VPS13B-206ENST00000496144 HHIPL1Q96JK4 782 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 PLA2G12BQ9BX93 195 aa10.22□□□□□ -0.77
VPS13B-206ENST00000496144 APBB1O00213 710 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 SCNN1DP51172 638 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 PRELPP51888 382 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
VPS13B-206ENST00000496144 SUGT1Q9Y2Z0 365 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 TJP1Q07157 1748 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 GSE1Q14687 1217 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 CD209Q9NNX6 404 aa10.21□□□□□ -0.77
VPS13B-206ENST00000496144 TRAF5O00463 557 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 SNAPC2Q13487 334 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 STAP2Q9UGK3 403 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 H7C1W4 665 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 SRGAP3O43295 1099 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 SAGE1Q9NXZ1 904 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 FBXO3Q9UK99 471 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.78
VPS13B-206ENST00000496144 MX1P20591 662 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 GADL1Q6ZQY3 521 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 ZNF287Q9HBT7 754 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 CHMP5Q9NZZ3 219 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 ADM5C9JUS6 153 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 UBE2Q2LH0YL09 131 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 POLR3DP05423 398 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-206ENST00000496144 MAP3K12Q12852 859 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 WDR78Q5VTH9 848 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 K7ELQ4 463 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-206ENST00000496144 FKBP1AP62942 108 aaKnown RBP10.2□□□□□ -0.78
VPS13B-206ENST00000496144 RAET1EQ8TD07 263 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 POLLQ9UGP5 575 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 UTYO14607 1347 aa10.2□□□□□ -0.78
VPS13B-206ENST00000496144 TTF1Q15361 905 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-206ENST00000496144 EYA2O00167 538 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 IRX3P78415 501 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 PICALMQ13492 652 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 JAG2Q9Y219 1238 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 FASTKD5Q7L8L6 764 aaKnown RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 USP40Q9NVE5 1235 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 PDIA6Q15084 440 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 TRPM4Q8TD43 1214 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 COA7Q96BR5 231 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 PARK7Q99497 189 aaKnown RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 IQSEC3Q9UPP2 1182 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 SURF6O75683 361 aaKnown RBP10.19□□□□□ -0.78
VPS13B-206ENST00000496144 RABEP1Q15276 862 aa10.19□□□□□ -0.78
VPS13B-206ENST00000496144 MPHOSPH10O00566 681 aaKnown RBP10.18□□□□□ -0.78
VPS13B-206ENST00000496144 CRKP46108 304 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 SH2D4AQ9H788 454 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 ERC2O15083 957 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 EFCC1Q9HA90 598 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 UNCXA6NJT0 531 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
VPS13B-206ENST00000496144 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
VPS13B-206ENST00000496144 NBPF7P0C2Y1 421 aaPredicted RBP10.18□□□□□ -0.78
VPS13B-206ENST00000496144 PRKAG2Q9UGJ0 569 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms