RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
CCDC39-207ENST00000495817 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
CCDC39-207ENST00000495817 RNF208Q9H0X6 261 aa9.63□□□□□ -0.87
CCDC39-207ENST00000495817 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
CCDC39-207ENST00000495817 CYP11A1P05108 521 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 FCGRTP55899 365 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 GSTM4Q03013 218 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 ANKRD34AQ69YU3 496 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 NRSN2Q9GZP1 204 aa9.62□□□□□ -0.87
CCDC39-207ENST00000495817 MEGF11A6BM72 1044 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 GNA15P30679 374 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 TAGLNQ01995 201 aaKnown RBP9.61□□□□□ -0.87
CCDC39-207ENST00000495817 AP3B2Q13367 1082 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 HGSNATQ68CP4 663 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 MEGF10Q96KG7 1140 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 RUSC1Q9BVN2 902 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 WWC3Q9ULE0 1092 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
CCDC39-207ENST00000495817 LOC100289279A0A1B0GTE1 492 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 H2AFB2P0C5Z0 115 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 GLB1P16278 677 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 DOC2BQ14184 412 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 AGGF1Q8N302 714 aaeCLIP9.6□□□□□ -0.87
CCDC39-207ENST00000495817 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 C12orf49Q9H741 205 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 IGSF5Q9NSI5 407 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 FAM8A1Q9UBU6 413 aa9.6□□□□□ -0.87
CCDC39-207ENST00000495817 PPP2R3AQ06190 1150 aa9.59□□□□□ -0.87
CCDC39-207ENST00000495817 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
CCDC39-207ENST00000495817 ALX3O95076 343 aa9.58□□□□□ -0.88
CCDC39-207ENST00000495817 HNRNPUQ00839 825 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC39-207ENST00000495817 RSPO4Q2I0M5 234 aaPredicted RBP9.58□□□□□ -0.88
CCDC39-207ENST00000495817 NKAPLQ5M9Q1 402 aa9.58□□□□□ -0.88
CCDC39-207ENST00000495817 TP53INP1Q96A56 240 aa9.58□□□□□ -0.88
CCDC39-207ENST00000495817 OSBPL7Q9BZF2 842 aa9.58□□□□□ -0.88
CCDC39-207ENST00000495817 SUGCTQ9HAC7 445 aa9.58□□□□□ -0.88
CCDC39-207ENST00000495817 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
CCDC39-207ENST00000495817 ITGAEP38570 1179 aa9.57□□□□□ -0.88
CCDC39-207ENST00000495817 FDX2Q6P4F2 183 aa9.57□□□□□ -0.88
CCDC39-207ENST00000495817 CORO1BQ9BR76 489 aa9.57□□□□□ -0.88
CCDC39-207ENST00000495817 TRIM56Q9BRZ2 755 aaKnown RBP9.57□□□□□ -0.88
CCDC39-207ENST00000495817 TMPRSS13Q9BYE2 586 aa9.57□□□□□ -0.88
CCDC39-207ENST00000495817 TMEM39AQ9NV64 488 aa9.57□□□□□ -0.88
CCDC39-207ENST00000495817 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
CCDC39-207ENST00000495817 POU4F3Q15319 338 aa9.56□□□□□ -0.88
CCDC39-207ENST00000495817 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
CCDC39-207ENST00000495817 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
CCDC39-207ENST00000495817 FAM46AQ96IP4 442 aaKnown RBP9.56□□□□□ -0.88
CCDC39-207ENST00000495817 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
CCDC39-207ENST00000495817 CYP4F12Q9HCS2 524 aa9.56□□□□□ -0.88
CCDC39-207ENST00000495817 GPN3Q9UHW5 284 aaPredicted RBP9.56□□□□□ -0.88
CCDC39-207ENST00000495817 FURINP09958 794 aa9.55□□□□□ -0.88
CCDC39-207ENST00000495817 EIF4BP23588 611 aaKnown RBP9.55□□□□□ -0.88
CCDC39-207ENST00000495817 MAOBP27338 520 aa9.55□□□□□ -0.88
CCDC39-207ENST00000495817 EXOSC6Q5RKV6 272 aaKnown RBP9.55□□□□□ -0.88
CCDC39-207ENST00000495817 DUSP9Q99956 384 aaKnown RBP9.55□□□□□ -0.88
CCDC39-207ENST00000495817 AKAP2Q9Y2D5 859 aa9.55□□□□□ -0.88
CCDC39-207ENST00000495817 DYRK3O43781 588 aa9.54□□□□□ -0.88
CCDC39-207ENST00000495817 UBL7Q96S82 380 aaPredicted RBP9.54□□□□□ -0.88
CCDC39-207ENST00000495817 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
CCDC39-207ENST00000495817 SART1O43290 800 aaKnown RBP9.53□□□□□ -0.88
CCDC39-207ENST00000495817 ADAM23O75077 832 aa9.53□□□□□ -0.88
CCDC39-207ENST00000495817 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
CCDC39-207ENST00000495817 XPCQ01831 940 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-207ENST00000495817 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
CCDC39-207ENST00000495817 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-207ENST00000495817 UTP4Q969X6 686 aaKnown RBP9.53□□□□□ -0.88
CCDC39-207ENST00000495817 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
CCDC39-207ENST00000495817 DHX15O43143 795 aaKnown RBP9.52□□□□□ -0.89
CCDC39-207ENST00000495817 TIAF1O95411 115 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 DLGAP3O95886 979 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 PRR23CQ6ZRP0 262 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 MYRFLQ96LU7 910 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 PARP2Q9UGN5 583 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 AK5Q9Y6K8 562 aa9.52□□□□□ -0.89
CCDC39-207ENST00000495817 TCF3P15923 654 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 PREPP48147 710 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 DAB2P98082 770 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 TMC4Q7Z404 712 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 NECAB3Q96P71 396 aaPredicted RBP9.51□□□□□ -0.89
CCDC39-207ENST00000495817 KRT82Q9NSB4 513 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
CCDC39-207ENST00000495817 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
CCDC39-207ENST00000495817 RECKO95980 971 aa9.5□□□□□ -0.89
CCDC39-207ENST00000495817 PSMD2Q13200 908 aa9.5□□□□□ -0.89
CCDC39-207ENST00000495817 SULF2Q8IWU5 870 aa9.5□□□□□ -0.89
CCDC39-207ENST00000495817 EMILIN2Q9BXX0 1053 aa9.5□□□□□ -0.89
CCDC39-207ENST00000495817 GSTP1P09211 210 aaKnown RBP9.49□□□□□ -0.89
CCDC39-207ENST00000495817 NME2P22392 152 aa9.49□□□□□ -0.89
CCDC39-207ENST00000495817 SLC51AQ86UW1 340 aa9.49□□□□□ -0.89
CCDC39-207ENST00000495817 ARMC10Q8N2F6 343 aa9.49□□□□□ -0.89
CCDC39-207ENST00000495817 C12orf50Q8NA57 414 aaPredicted RBP9.49□□□□□ -0.89
CCDC39-207ENST00000495817 SEMA6BQ9H3T3 888 aa9.49□□□□□ -0.89
CCDC39-207ENST00000495817 CTSBP07858 339 aa9.48□□□□□ -0.89
CCDC39-207ENST00000495817 ADH5P11766 374 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms