RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 WNK4Q96J92 1243 aa23.04■■□□□ 1.28
CLCNKA-207ENST00000495784 ARAP2Q8WZ64 1704 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 CCER2I3L3R5 266 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 GPR25O00155 361 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 ALDH1A1P00352 501 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 INHBEP58166 350 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 GRIK5Q16478 980 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 NOB1Q9ULX3 412 aaKnown RBP23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 KIF16BQ96L93 1317 aa23.03■■□□□ 1.28
CLCNKA-207ENST00000495784 TCP10L2B9ZVM9 353 aa23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 USP2O75604 605 aaPredicted RBP23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 TNNI2P48788 182 aa23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 HDLBPQ00341 1268 aaKnown RBP23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 NOM1Q5C9Z4 860 aaKnown RBP23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 ANKRD13AQ8IZ07 590 aa23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 TEKT1Q969V4 418 aa23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 API5Q9BZZ5 524 aaKnown RBP23.02■■□□□ 1.28
CLCNKA-207ENST00000495784 SLC5A1P13866 664 aa23.01■■□□□ 1.27
CLCNKA-207ENST00000495784 FGFR2P21802 821 aa23.01■■□□□ 1.27
CLCNKA-207ENST00000495784 PKN2Q16513 984 aaKnown RBP23.01■■□□□ 1.27
CLCNKA-207ENST00000495784 CFHR5Q9BXR6 569 aa23.01■■□□□ 1.27
CLCNKA-207ENST00000495784 LPIN2Q92539 896 aa23■■□□□ 1.27
CLCNKA-207ENST00000495784 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
CLCNKA-207ENST00000495784 FKTNO75072 461 aa22.99■■□□□ 1.27
CLCNKA-207ENST00000495784 IFNL1Q8IU54 200 aa22.99■■□□□ 1.27
CLCNKA-207ENST00000495784 TMEM39BQ9GZU3 492 aa22.99■■□□□ 1.27
CLCNKA-207ENST00000495784 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
CLCNKA-207ENST00000495784 MAST3O60307 1309 aa22.99■■□□□ 1.27
CLCNKA-207ENST00000495784 CDAN1Q8IWY9 1227 aa22.98■■□□□ 1.27
CLCNKA-207ENST00000495784 TEPSINQ96N21 525 aa22.98■■□□□ 1.27
CLCNKA-207ENST00000495784 SIL1Q9H173 461 aa22.98■■□□□ 1.27
CLCNKA-207ENST00000495784 R3HDMLQ9H3Y0 253 aa22.98■■□□□ 1.27
CLCNKA-207ENST00000495784 TMOD2Q9NZR1 351 aa22.98■■□□□ 1.27
CLCNKA-207ENST00000495784 SOX10P56693 466 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 ATG9AQ7Z3C6 839 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 ZDHHC15Q96MV8 337 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 ELP3Q9H9T3 547 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 FBXO3Q9UK99 471 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 HPS5Q9UPZ3 1129 aa22.97■■□□□ 1.27
CLCNKA-207ENST00000495784 IGF2BP3O00425 579 aaKnown RBP eCLIP22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 CIAO1O76071 339 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 CACNB3P54284 484 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 WDR66Q8TBY9 1149 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 MRIQ9BWK5 157 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 CEP126Q9P2H0 1117 aa22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 LRRFIP2Q9Y608 721 aaKnown RBP22.96■■□□□ 1.27
CLCNKA-207ENST00000495784 GJA5P36382 358 aa22.95■■□□□ 1.26
CLCNKA-207ENST00000495784 RARSP54136 660 aaKnown RBP22.95■■□□□ 1.26
CLCNKA-207ENST00000495784 ATP2B3Q16720 1220 aa22.95■■□□□ 1.26
CLCNKA-207ENST00000495784 OPTNQ96CV9 577 aa22.95■■□□□ 1.26
CLCNKA-207ENST00000495784 GNL3LQ9NVN8 582 aaKnown RBP22.94■■□□□ 1.26
CLCNKA-207ENST00000495784 CSADQ9Y600 493 aa22.94■■□□□ 1.26
CLCNKA-207ENST00000495784 IL15P40933 162 aaPredicted RBP22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 MAP3K9P80192 1104 aa22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 APOBEC3HQ6NTF7 200 aaKnown RBP22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 FBXO46Q6PJ61 603 aaPredicted RBP22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 HHIPL2Q6UWX4 724 aa22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 MEIS3Q99687 375 aa22.93■■□□□ 1.26
CLCNKA-207ENST00000495784 VGLL4Q14135 290 aa22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 FKBP1CQ5VVH2 108 aa22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 FAM83AQ86UY5 434 aa22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 ARHGAP45Q92619 1136 aa22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 HOOK2Q96ED9 719 aa22.92■■□□□ 1.26
CLCNKA-207ENST00000495784 PA2G4Q9UQ80 394 aaKnown RBP22.91■■□□□ 1.26
CLCNKA-207ENST00000495784 TESPA1A2RU30 521 aaPredicted RBP22.9■■□□□ 1.26
CLCNKA-207ENST00000495784 CRHR2Q13324 411 aa22.9■■□□□ 1.26
CLCNKA-207ENST00000495784 CNKSR2Q8WXI2 1034 aa22.9■■□□□ 1.26
CLCNKA-207ENST00000495784 COPRSQ9NQ92 184 aa22.9■■□□□ 1.26
CLCNKA-207ENST00000495784 OTOFQ9HC10 1997 aa22.9■■□□□ 1.26
CLCNKA-207ENST00000495784 GNAI3P08754 354 aa22.89■■□□□ 1.25
CLCNKA-207ENST00000495784 INTS3Q68E01 1043 aaKnown RBP22.89■■□□□ 1.25
CLCNKA-207ENST00000495784 OTUD5Q96G74 571 aa22.89■■□□□ 1.25
CLCNKA-207ENST00000495784 PTPN18Q99952 460 aa22.89■■□□□ 1.25
CLCNKA-207ENST00000495784 LAMB1P07942 1786 aa22.89■■□□□ 1.25
CLCNKA-207ENST00000495784 SEMA3EO15041 775 aa22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 IPO8O15397 1037 aaKnown RBP22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 LDHBP07195 334 aaKnown RBP22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 WRNIP1Q96S55 665 aa22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 DENND2AQ9ULE3 1009 aa22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 TRIM17Q9Y577 477 aa22.88■■□□□ 1.25
CLCNKA-207ENST00000495784 MYH13Q9UKX3 1938 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 PRDX5P30044 214 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 PHKA1P46020 1223 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 GTF2A2P52657 109 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 DIXDC1Q155Q3 683 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 DCAF15Q66K64 600 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 ERO1AQ96HE7 468 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 MS4A4AQ96JQ5 239 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 DAGLAQ9Y4D2 1042 aa22.87■■□□□ 1.25
CLCNKA-207ENST00000495784 CCL15-CCL14A0A0B4J2E2 113 aa22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 SPDYE5A6NIY4 337 aa22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 SRGAP3O43295 1099 aa22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 CCL15Q16663 113 aa22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 BRI3BPQ8WY22 251 aa22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 RPAP1Q9BWH6 1393 aaPredicted RBP22.86■■□□□ 1.25
CLCNKA-207ENST00000495784 SALL1Q9NSC2 1324 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms