RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	ZIC5	Q96T25	663 aa		13.58	□□□□□ -0.24
DCTN1-223	ENST00000495643	MRI	Q9BWK5	157 aa		13.58	□□□□□ -0.24
DCTN1-223	ENST00000495643		A0A1B0GUL7	405 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	CTCF	P49711	727 aa	Predicted RBP	13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	AIDA	Q96BJ3	306 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	TDRD3	Q9H7E2	651 aa	Known RBP	13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	C1orf115	Q9H7X2	142 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	GNL3L	Q9NVN8	582 aa	Known RBP	13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	ZNF70	Q9UC06	446 aa	Predicted RBP	13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	RCAN3	Q9UKA8	241 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	AKAP2	Q9Y2D5	859 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	PPP2R3B	Q9Y5P8	575 aa		13.57	□□□□□ -0.24
DCTN1-223	ENST00000495643	UBE2Q2L	H0YL09	131 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	SEMA3E	O15041	775 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	SLC10A3	P09131	477 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	MS4A1	P11836	297 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	NF2	P35240	595 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	1e-7	■■■□□ 15.1
DCTN1-223	ENST00000495643	CCDC102B	Q68D86	513 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	TEKT1	Q969V4	418 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	XAGE2	Q96GT9	111 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	VEZT	Q9HBM0	779 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	DENND2A	Q9ULE3	1009 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	SSC5D	A1L4H1	1573 aa		13.56	□□□□□ -0.24
DCTN1-223	ENST00000495643	HSPA8	P11142	646 aa	Known RBP	13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	RASA3	Q14644	834 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	HHIPL2	Q6UWX4	724 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	RASAL3	Q86YV0	1011 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	ZDHHC15	Q96MV8	337 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	PRDM10	Q9NQV6	1147 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	MAST3	O60307	1309 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	SALL1	Q9NSC2	1324 aa		13.55	□□□□□ -0.24
DCTN1-223	ENST00000495643	PRDX5	P30044	214 aa		13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	LBX1	P52954	281 aa		13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	RASGRF1	Q13972	1273 aa		13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	TTLL12	Q14166	644 aa	Predicted RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	MVP	Q14764	893 aa	Known RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	LDLRAD1	Q5T700	205 aa		13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	NEUROD6	Q96NK8	337 aa		13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	NOP58	Q9Y2X3	529 aa	Known RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	PDS5A	Q29RF7	1337 aa	Known RBP	13.54	□□□□□ -0.24
DCTN1-223	ENST00000495643	KIF23	Q02241	960 aa	Predicted RBP	13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	TNFAIP1	Q13829	316 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	PRKG1	Q13976	671 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	MAP3K11	Q16584	847 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	SUPT20HL1	Q3ZLR7	823 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	CEP85	Q6P2H3	762 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	ARMC9	Q7Z3E5	817 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	TEPSIN	Q96N21	525 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	BEGAIN	Q9BUH8	593 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	GPR108	Q9NPR9	543 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	FZD1	Q9UP38	647 aa		13.53	□□□□□ -0.24
DCTN1-223	ENST00000495643	AKAP11	Q9UKA4	1901 aa		13.52	□□□□□ -0.24
DCTN1-223	ENST00000495643	MYH2	Q9UKX2	1941 aa		13.52	□□□□□ -0.24
DCTN1-223	ENST00000495643	TCP10L2	B9ZVM9	353 aa		13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	CA12	O43570	354 aa		13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	SURF6	O75683	361 aa	Known RBP	13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	LDHB	P07195	334 aa	Known RBP	13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	DIXDC1	Q155Q3	683 aa		13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	IFFO2	Q5TF58	517 aa		13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	CSRNP1	Q96S65	589 aa		13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	ANGEL1	Q9UNK9	670 aa	Known RBP	13.52	□□□□□ -0.25
DCTN1-223	ENST00000495643	PPP1R12B	O60237	982 aa	Predicted RBP	13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	USP2	O75604	605 aa	Predicted RBP	13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	ARID4A	P29374	1257 aa	Predicted RBP	13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	CACNB3	P54284	484 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	TNNI3K	Q59H18	835 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	FKBP1C	Q5VVH2	108 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	CDAN1	Q8IWY9	1227 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	TMEM39B	Q9GZU3	492 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	ZBTB40	Q9NUA8	1239 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	DDX19B	Q9UMR2	479 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	COG6	Q9Y2V7	657 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	DAGLA	Q9Y4D2	1042 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	FPGT-TNNI3K	V9GXZ4	949 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	OTOF	Q9HC10	1997 aa		13.51	□□□□□ -0.25
DCTN1-223	ENST00000495643	LAMB1	P07942	1786 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	UNCX	A6NJT0	531 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	TNNI2	P48788	182 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	OS9	Q13438	667 aa	Predicted RBP	13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	GORAB	Q5T7V8	394 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	FAM83A	Q86UY5	434 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	REM2	Q8IYK8	340 aa	Predicted RBP	13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	ZGPAT	Q8N5A5	531 aa	Known RBP	13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	HMG20B	Q9P0W2	317 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	TSKS	Q9UJT2	592 aa		13.5	□□□□□ -0.25
DCTN1-223	ENST00000495643	PDE3A	Q14432	1141 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	C20orf194	Q5TEA3	1177 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	CDC42EP5	Q6NZY7	148 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	PI16	Q6UXB8	463 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	TNS4	Q8IZW8	715 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	SPATA5	Q8NB90	893 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	CLMN	Q96JQ2	1002 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	RNF186	Q9NXI6	227 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	TMOD2	Q9NZR1	351 aa		13.49	□□□□□ -0.25
DCTN1-223	ENST00000495643	GAK	O14976	1311 aa		13.48	□□□□□ -0.25
DCTN1-223	ENST00000495643	MCAM	P43121	646 aa		13.48	□□□□□ -0.25
DCTN1-223	ENST00000495643	IREB2	P48200	963 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms