RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SERPINA10Q9UK55 444 aa12.12□□□□□ -0.47
UBR4-216ENST00000494503 FAM205AQ6ZU69 1335 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 MROH5Q6ZUA9 1318 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 GJA5P36382 358 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 CACNB3P54284 484 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
UBR4-216ENST00000494503 CFHR5Q9BXR6 569 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
UBR4-216ENST00000494503 CCL15-CCL14A0A0B4J2E2 113 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
UBR4-216ENST00000494503 SP3Q02447 781 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 VGLL4Q14135 290 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 CCL15Q16663 113 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 LAMB1P07942 1786 aa12.1□□□□□ -0.47
UBR4-216ENST00000494503 UNCXA6NJT0 531 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
UBR4-216ENST00000494503 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 PTPN22Q9Y2R2 807 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 CENPFP49454 3210 aa12.09□□□□□ -0.47
UBR4-216ENST00000494503 POTEFA5A3E0 1075 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 BCAMP50895 628 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 GTF2A2P52657 109 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 GRIK5Q16478 980 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 WRNIP1Q96S55 665 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 PTPN18Q99952 460 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
UBR4-216ENST00000494503 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
UBR4-216ENST00000494503 IFIT1P09914 478 aaKnown RBP12.07□□□□□ -0.48
UBR4-216ENST00000494503 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 SLC4A8Q2Y0W8 1093 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 SLC9C1Q4G0N8 1177 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
UBR4-216ENST00000494503 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 MAST3O60307 1309 aa12.07□□□□□ -0.48
UBR4-216ENST00000494503 PDE8BO95263 885 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 SLC5A1P13866 664 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 KIF22Q14807 665 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
UBR4-216ENST00000494503 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBR4-216ENST00000494503 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
UBR4-216ENST00000494503 HOOK2Q96ED9 719 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 HTTP42858 3142 aa12.06□□□□□ -0.48
UBR4-216ENST00000494503 CETPP11597 493 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
UBR4-216ENST00000494503 TCP10Q12799 353 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 MIGA2Q7L4E1 593 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
UBR4-216ENST00000494503 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 GCC1Q96CN9 775 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 SIL1Q9H173 461 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 PTPRCP08575 1304 aa12.05□□□□□ -0.48
UBR4-216ENST00000494503 ZSWIM8A7E2V4 1837 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
UBR4-216ENST00000494503 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
UBR4-216ENST00000494503 SNAPC2Q13487 334 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
UBR4-216ENST00000494503 ERO1BQ86YB8 467 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 ZDHHC15Q96MV8 337 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 RBBP6Q7Z6E9 1792 aaKnown RBP12.04□□□□□ -0.48
UBR4-216ENST00000494503 UTYO14607 1347 aa12.04□□□□□ -0.48
UBR4-216ENST00000494503 MKI67P46013 3256 aaKnown RBP12.03□□□□□ -0.48
UBR4-216ENST00000494503 SPDYE5A6NIY4 337 aa12.03□□□□□ -0.48
UBR4-216ENST00000494503 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
UBR4-216ENST00000494503 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
UBR4-216ENST00000494503 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
UBR4-216ENST00000494503 CEP290O15078 2479 aa12.03□□□□□ -0.48
UBR4-216ENST00000494503 BRCA2P51587 3418 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 BTBD19C9JJ37 291 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 E9PSI1 815 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 EYA2O00167 538 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 IRF6O14896 467 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 CAP1Q01518 475 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 FAM83AQ86UY5 434 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms