RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 AOX1Q06278 1338 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 LAMB1P07942 1786 aa16.35■□□□□ 0.21
ERCC3-209ENST00000494464 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 SEMA3EO15041 775 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 RLBP1P12271 317 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 TNFAIP1Q13829 316 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 GRIK5Q16478 980 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
ERCC3-209ENST00000494464 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
ERCC3-209ENST00000494464 ITPRIPQ8IWB1 547 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 MRIQ9BWK5 157 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 VEZTQ9HBM0 779 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
ERCC3-209ENST00000494464 SALL1Q9NSC2 1324 aa16.33■□□□□ 0.2
ERCC3-209ENST00000494464 PHKA1P46020 1223 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 LBX1P52954 281 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 TTLL12Q14166 644 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-209ENST00000494464 MOB2Q70IA6 237 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 ZDHHC15Q96MV8 337 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-209ENST00000494464 RCAN3Q9UKA8 241 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 OTOFQ9HC10 1997 aa16.32■□□□□ 0.2
ERCC3-209ENST00000494464 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-209ENST00000494464 ADORA1P30542 326 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 TFCP2Q12800 502 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 POLA2Q14181 598 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 ARMC9Q7Z3E5 817 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 SSH3Q8TE77 659 aa16.31■□□□□ 0.2
ERCC3-209ENST00000494464 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
ERCC3-209ENST00000494464 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
ERCC3-209ENST00000494464 MS4A1P11836 297 aa16.3■□□□□ 0.2
ERCC3-209ENST00000494464 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-209ENST00000494464 RASA3Q14644 834 aa16.3■□□□□ 0.2
ERCC3-209ENST00000494464 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
ERCC3-209ENST00000494464 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
ERCC3-209ENST00000494464 HHIPL2Q6UWX4 724 aa16.3■□□□□ 0.2
ERCC3-209ENST00000494464 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
ERCC3-209ENST00000494464 ATP8B2P98198 1209 aa16.29■□□□□ 0.2
ERCC3-209ENST00000494464 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERCC3-209ENST00000494464 LDLRAD1Q5T700 205 aa16.29■□□□□ 0.2
ERCC3-209ENST00000494464 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
ERCC3-209ENST00000494464 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
ERCC3-209ENST00000494464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-209ENST00000494464 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
ERCC3-209ENST00000494464 UNCXA6NJT0 531 aa16.28■□□□□ 0.2
ERCC3-209ENST00000494464 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-209ENST00000494464 PRDX5P30044 214 aa16.28■□□□□ 0.2
ERCC3-209ENST00000494464 TNNI2P48788 182 aa16.28■□□□□ 0.2
ERCC3-209ENST00000494464 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
ERCC3-209ENST00000494464 TIMM10P62072 90 aa16.28■□□□□ 0.2
ERCC3-209ENST00000494464 APOBEC3HQ6NTF7 200 aaKnown RBP16.28■□□□□ 0.2
ERCC3-209ENST00000494464 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
ERCC3-209ENST00000494464 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
ERCC3-209ENST00000494464 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
ERCC3-209ENST00000494464 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.2
ERCC3-209ENST00000494464 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 NBPF12Q5TAG4 269 aaPredicted RBP16.27■□□□□ 0.2
ERCC3-209ENST00000494464 FKBP1CQ5VVH2 108 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 TEPSINQ96N21 525 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 TMOD2Q9NZR1 351 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.2
ERCC3-209ENST00000494464 MAST2Q6P0Q8 1798 aa16.27■□□□□ 0.19
ERCC3-209ENST00000494464 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 PRKG1Q13976 671 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 FAM83AQ86UY5 434 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 CSRNP1Q96S65 589 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
ERCC3-209ENST00000494464 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
ERCC3-209ENST00000494464 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 FZD1Q9UP38 647 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
ERCC3-209ENST00000494464 ARID4AP29374 1257 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-209ENST00000494464 IREB2P48200 963 aaKnown RBP16.25■□□□□ 0.19
ERCC3-209ENST00000494464 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
ERCC3-209ENST00000494464 NEUROD6Q96NK8 337 aa16.25■□□□□ 0.19
ERCC3-209ENST00000494464 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
ERCC3-209ENST00000494464 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
ERCC3-209ENST00000494464 GAKO14976 1311 aa16.24■□□□□ 0.19
ERCC3-209ENST00000494464 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
ERCC3-209ENST00000494464 CACNB3P54284 484 aa16.24■□□□□ 0.19
ERCC3-209ENST00000494464 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-209ENST00000494464 SPRYD7Q5W111 196 aa16.24■□□□□ 0.19
ERCC3-209ENST00000494464 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
ERCC3-209ENST00000494464 RNF186Q9NXI6 227 aa16.24■□□□□ 0.19
ERCC3-209ENST00000494464 DOCK2Q92608 1830 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms