RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 RSBN1LQ6PCB5 846 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 USP17L1Q7RTZ2 530 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 AGBL3Q8NEM8 1001 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
ITGB1-217ENST00000494395 FAM84BQ96KN1 310 aaPredicted RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 ADARB2Q9NS39 739 aaKnown RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 CNOT7Q9UIV1 285 aaKnown RBP10.92□□□□□ -0.66
ITGB1-217ENST00000494395 POLR2AP24928 1970 aaKnown RBP10.91□□□□□ -0.66
ITGB1-217ENST00000494395 SLC34A2O95436 690 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 EGFRP00533 1210 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 MS4A1P11836 297 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 HSPA6P17066 643 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 OSBPP22059 807 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 ZNF280AP59817 542 aaPredicted RBP10.91□□□□□ -0.66
ITGB1-217ENST00000494395 ATP8B2P98198 1209 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 FBXO33Q7Z6M2 555 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
ITGB1-217ENST00000494395 SSH3Q8TE77 659 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 SIL1Q9H173 461 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 PGAP2Q9UHJ9 254 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.91□□□□□ -0.66
ITGB1-217ENST00000494395 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
ITGB1-217ENST00000494395 PASKQ96RG2 1323 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.66
ITGB1-217ENST00000494395 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
ITGB1-217ENST00000494395 GYG1P46976 350 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 PUM3Q15397 648 aaKnown RBP10.9□□□□□ -0.66
ITGB1-217ENST00000494395 TMEM132AQ24JP5 1023 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
ITGB1-217ENST00000494395 CERS5Q8N5B7 392 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 KRI1Q8N9T8 703 aaKnown RBP10.9□□□□□ -0.66
ITGB1-217ENST00000494395 MXD3Q9BW11 206 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 ECM29Q5VYK3 1845 aa10.9□□□□□ -0.66
ITGB1-217ENST00000494395 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 MYO3BQ8WXR4 1341 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 H7C1D1 291 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 GPR37O15354 613 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 FKBP1AP62942 108 aaKnown RBP10.89□□□□□ -0.67
ITGB1-217ENST00000494395 GTF2IP78347 998 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 TTLL5Q6EMB2 1281 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 CEP85Q6P2H3 762 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 DDX19BQ9UMR2 479 aa10.89□□□□□ -0.67
ITGB1-217ENST00000494395 COL1A1P02452 1464 aaPredicted RBP10.88□□□□□ -0.67
ITGB1-217ENST00000494395 SASH1O94885 1247 aa10.88□□□□□ -0.67
ITGB1-217ENST00000494395 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
ITGB1-217ENST00000494395 HIBADHP31937 336 aaKnown RBP10.88□□□□□ -0.67
ITGB1-217ENST00000494395 ATP2B3Q16720 1220 aa10.88□□□□□ -0.67
ITGB1-217ENST00000494395 MAP1SQ66K74 1059 aaPredicted RBP10.88□□□□□ -0.67
ITGB1-217ENST00000494395 LPIN2Q92539 896 aa10.88□□□□□ -0.67
ITGB1-217ENST00000494395 USP17L8P0C7I0 530 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 SLC5A1P13866 664 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 BCAMP50895 628 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
ITGB1-217ENST00000494395 TFCP2Q12800 502 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 KIF4BQ2VIQ3 1234 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
ITGB1-217ENST00000494395 SIRT2Q8IXJ6 389 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 CNTROBQ8N137 903 aa10.87□□□□□ -0.67
ITGB1-217ENST00000494395 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.87□□□□□ -0.67
ITGB1-217ENST00000494395 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
ITGB1-217ENST00000494395 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
ITGB1-217ENST00000494395 ADORA1P30542 326 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 MMP14P50281 582 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 APLP1P51693 650 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 CAVIN4Q5BKX8 364 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 FBXW7Q969H0 707 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 MYOZ2Q9NPC6 264 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 IQSEC3Q9UPP2 1182 aaPredicted RBP10.86□□□□□ -0.67
ITGB1-217ENST00000494395 AKAP11Q9UKA4 1901 aa10.86□□□□□ -0.67
ITGB1-217ENST00000494395 ASTN2O75129 1339 aaPredicted RBP10.85□□□□□ -0.67
ITGB1-217ENST00000494395 CEP350Q5VT06 3117 aa10.85□□□□□ -0.67
ITGB1-217ENST00000494395 A0A1B0GUL7 405 aa10.85□□□□□ -0.67
ITGB1-217ENST00000494395 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.672e-15■■■□□ 17.5
ITGB1-217ENST00000494395 GRIK5Q16478 980 aa10.85□□□□□ -0.67
ITGB1-217ENST00000494395 KIAA0825Q8IV33 1275 aa10.85□□□□□ -0.67
ITGB1-217ENST00000494395 JAG2Q9Y219 1238 aa10.85□□□□□ -0.67
ITGB1-217ENST00000494395 WNT10BO00744 389 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 PHKA1P46020 1223 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 TIMM10P62072 90 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 HTRA3P83110 453 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 G3BP1Q13283 466 aaKnown RBP eCLIP10.84□□□□□ -0.67
ITGB1-217ENST00000494395 MFSD14BQ5SR56 506 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
ITGB1-217ENST00000494395 DNAJC5GQ8N7S2 189 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 GGA3Q9NZ52 723 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
ITGB1-217ENST00000494395 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms