RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 NYXQ9GZU5 481 aa7.59□□□□□ -1.19
NXF3-206ENST00000494300 CD2APQ9Y5K6 639 aa7.59□□□□□ -1.19
NXF3-206ENST00000494300 RPS6KL1Q9Y6S9 549 aa7.59□□□□□ -1.19
NXF3-206ENST00000494300 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 VAMP4O75379 141 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 SERPINB2P05120 415 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 MCCP23508 829 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 GPTP24298 496 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
NXF3-206ENST00000494300 AAMPQ13685 434 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 MRPL58Q14197 206 aaKnown RBP7.58□□□□□ -1.2
NXF3-206ENST00000494300 TUSC1Q2TAM9 212 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 TBC1D9BQ66K14 1250 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 FAM43BQ6ZT52 329 aaPredicted RBP7.58□□□□□ -1.2
NXF3-206ENST00000494300 TTLL7Q6ZT98 887 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 STK32AQ8WU08 396 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 NLRP7Q8WX94 980 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 YTHDC1Q96MU7 727 aaKnown RBP7.58□□□□□ -1.2
NXF3-206ENST00000494300 PLA2G2EQ9NZK7 142 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 PRKAG2Q9UGJ0 569 aa7.58□□□□□ -1.2
NXF3-206ENST00000494300 MYH14Q7Z406 1995 aaKnown RBP7.58□□□□□ -1.2
NXF3-206ENST00000494300 HMGB1P1B2RPK0 211 aaPredicted RBP7.57□□□□□ -1.2
NXF3-206ENST00000494300 POLRMTO00411 1230 aaKnown RBP7.57□□□□□ -1.2
NXF3-206ENST00000494300 SCAMP3O14828 347 aaKnown RBP7.57□□□□□ -1.2
NXF3-206ENST00000494300 TM4SF1P30408 202 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 PDE6BP35913 854 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 SERPINB4P48594 390 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 DDR1Q08345 913 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 HLFQ16534 295 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 C9orf131Q5VYM1 1079 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 SYT17Q9BSW7 474 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 SMC4Q9NTJ3 1288 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 PDZRN3Q9UPQ7 1066 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 C4AP0C0L4 1744 aa7.57□□□□□ -1.2
NXF3-206ENST00000494300 ATP10DQ9P241 1426 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 H0YIN7 160 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 TCIRG1Q13488 830 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 GPR162Q16538 588 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 PLEKHG6Q3KR16 790 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 KSR2Q6VAB6 950 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
NXF3-206ENST00000494300 SPOCK3Q9BQ16 436 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 UTP14AQ9BVJ6 771 aaKnown RBP7.56□□□□□ -1.2
NXF3-206ENST00000494300 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
NXF3-206ENST00000494300 MAP3K2Q9Y2U5 619 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 SCN7AQ01118 1682 aa7.56□□□□□ -1.2
NXF3-206ENST00000494300 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 PI4KAP2A4QPH2 592 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 IPO8O15397 1037 aaKnown RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 TGFB2P61812 414 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 RBL2Q08999 1139 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 FOXD4Q12950 439 aaPredicted RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 ALDH1L2Q3SY69 923 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 C4orf46Q504U0 113 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 ZNF746Q6NUN9 644 aaPredicted RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 C2CD5Q86YS7 1000 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 RPUSD2Q8IZ73 545 aaKnown RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 PI4KAP1Q8N8J0 262 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 MYD88Q99836 296 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 BRIP1Q9BX63 1249 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 IRF2BPLQ9H1B7 796 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 TMX4Q9H1E5 349 aaPredicted RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 GABBR1Q9UBS5 961 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 TRMT112Q9UI30 125 aaKnown RBP7.55□□□□□ -1.2
NXF3-206ENST00000494300 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
NXF3-206ENST00000494300 PTPRCP08575 1304 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 KIF16BQ96L93 1317 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 C10orf71Q711Q0 1435 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 IBSPP21815 317 aaPredicted RBP7.54□□□□□ -1.2
NXF3-206ENST00000494300 PAX3P23760 479 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 VAC14Q08AM6 782 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 ZFYVE27Q5T4F4 411 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 PRR5LQ6MZQ0 368 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 SLC4A10Q6U841 1118 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 LRP10Q7Z4F1 713 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 JAZF1Q86VZ6 243 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 ZNF34Q8IZ26 560 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 DNAAF4Q8WXU2 420 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
NXF3-206ENST00000494300 ZNF622Q969S3 477 aaKnown RBP eCLIP7.54□□□□□ -1.2
NXF3-206ENST00000494300 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
NXF3-206ENST00000494300 CWC25Q9NXE8 425 aaPredicted RBP7.54□□□□□ -1.2
NXF3-206ENST00000494300 PIM2Q9P1W9 311 aa7.54□□□□□ -1.2
NXF3-206ENST00000494300 IBTKQ9P2D0 1353 aaPredicted RBP7.54□□□□□ -1.2
NXF3-206ENST00000494300 SH3TC1Q8TE82 1336 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 A0A0G2JLW4 131 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 DDX11L8A8MPP1 907 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 GRIN3BO60391 1043 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 CFHP08603 1231 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 DPEP1P16444 411 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 DALRD3Q5D0E6 543 aaKnown RBP7.53□□□□□ -1.2
NXF3-206ENST00000494300 SUSD4Q5VX71 490 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 TSHZ1Q6ZSZ6 1077 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 NLRP10Q86W26 655 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 NUTM1Q86Y26 1132 aa7.53□□□□□ -1.2
NXF3-206ENST00000494300 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms