RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PLXNC1O60486 1568 aa3.9□□□□□ -1.78
CDC42EP3-205ENST00000494083 PDE2AO00408 941 aaPredicted RBP3.9□□□□□ -1.79
CDC42EP3-205ENST00000494083 FAM13AO94988 1023 aa3.9□□□□□ -1.79
CDC42EP3-205ENST00000494083 IGHA2P01877 340 aa3.9□□□□□ -1.79
CDC42EP3-205ENST00000494083 MUC3BQ9H195 1237 aa3.9□□□□□ -1.79
CDC42EP3-205ENST00000494083 SOX13Q9UN79 622 aa3.9□□□□□ -1.79
CDC42EP3-205ENST00000494083 SPATA31E1Q6ZUB1 1445 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 PTPRAP18433 802 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 SF3B2Q13435 895 aaKnown RBP3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 ARMC10Q8N2F6 343 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 MRPL18Q9H0U6 180 aaKnown RBP3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 SPHKAPQ2M3C7 1700 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 EHBP1L1Q8N3D4 1523 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 SCO2A0A1W2PP80 73 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 H3BRJ5 948 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 PCSK2P16519 638 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 GRIA4P48058 902 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 TTC16Q8NEE8 873 aa3.89□□□□□ -1.79
CDC42EP3-205ENST00000494083 PRR23CQ6ZRP0 262 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 TXNDC2Q86VQ3 553 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 NXPE3Q969Y0 559 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 NPHS2Q9NP85 383 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ECEL1O95672 775 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 PREPP48147 710 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 DUOXA2Q1HG44 320 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 SPRED3Q2MJR0 410 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 PI16Q6UXB8 463 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ANKRD26Q9UPS8 1709 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ZNF608Q9ULD9 1512 aaPredicted RBP3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ADGRL2O95490 1459 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 SOX1O00570 391 aaPredicted RBP3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 H2AFB1P0C5Y9 115 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 H2AFB2P0C5Z0 115 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ALKBH2Q6NS38 261 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 Q6ZS46 218 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 TMEM130Q8N3G9 435 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 ADAM19Q9H013 955 aa3.88□□□□□ -1.79
CDC42EP3-205ENST00000494083 SEC31BQ9NQW1 1179 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 CCDC18Q5T9S5 1454 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 PREX2Q70Z35 1606 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 INSRP06213 1382 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 ABCC2Q92887 1545 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 USP26Q9BXU7 913 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 AMOTL2Q9Y2J4 779 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 MROH1Q8NDA8 1641 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 HMX2A2RU54 273 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 CTSBP07858 339 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 DRD2P14416 443 aa3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 TMEM102Q8N9M5 508 aaPredicted RBP3.87□□□□□ -1.79
CDC42EP3-205ENST00000494083 EDN3P14138 238 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 BSNDQ8WZ55 320 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 PCGF6Q9BYE7 350 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 ZFYVE28Q9HCC9 887 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 BRPF3Q9ULD4 1205 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 ARHGEF5Q12774 1597 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 IQGAP3Q86VI3 1631 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 LOC100289279A0A1B0GTE1 492 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 USP5P45974 858 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 IKBKEQ14164 716 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 UTP4Q969X6 686 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 TCF12Q99081 682 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 CDC42BPBQ9Y5S2 1711 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 A0A1W2PP55 124 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 RPLP1P05386 114 aaKnown RBP3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 ESRRAP11474 423 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 BHLHE41Q9C0J9 482 aaPredicted RBP3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 NRSN2Q9GZP1 204 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 EGFL7Q9UHF1 273 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 CAMSAP1Q5T5Y3 1602 aa3.86□□□□□ -1.79
CDC42EP3-205ENST00000494083 LOC105371045A0A1W2PR82 267 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 PIP4K2BP78356 416 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 MAP4K3Q8IVH8 894 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 KLHL23Q8NBE8 558 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 FAM129BQ96TA1 746 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 NIF3L1Q9GZT8 377 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 MTMR7Q9Y216 660 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 CASKIN1Q8WXD9 1431 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 TGFB1P01137 390 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 CABP4P57796 275 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 EHHADHQ08426 723 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 ZNF423Q2M1K9 1284 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 TRIM42Q8IWZ5 723 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 SHISA5Q8N114 240 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 EPS8L3Q8TE67 593 aaKnown RBP3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 SETDB2Q96T68 719 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 SRA1Q9HD15 236 aaKnown RBP3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 PODXL2Q9NZ53 605 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 HFM1A2PYH4 1435 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 MED26O95402 600 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 ZNF157P51786 506 aaPredicted RBP3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 FAM117BQ6P1L5 589 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 CCNJLQ8IV13 435 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 TMC1Q8TDI8 760 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 RNF123Q5XPI4 1314 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 MYOM3Q5VTT5 1437 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 VWDEQ8N2E2 1590 aa3.85□□□□□ -1.79
CDC42EP3-205ENST00000494083 EIF1AYO14602 144 aaKnown RBP3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 C19orf57Q0VDD7 668 aa3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 FHAD1B1AJZ9 1412 aa3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 CCDC144AA2RUR9 1427 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms