RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PAPPA2Q9BXP8 1791 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 TRIM27P14373 513 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 MKRN3Q13064 507 aaKnown RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 PUM3Q15397 648 aaKnown RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 CAVIN4Q5BKX8 364 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 INTS3Q68E01 1043 aaKnown RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 ARHGAP45Q92619 1136 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 CLUAP1Q96AJ1 413 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
LRCH3-219ENST00000494069 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
LRCH3-219ENST00000494069 KIF16BQ96L93 1317 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-219ENST00000494069 TRPA1O75762 1119 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
LRCH3-219ENST00000494069 NF2P35240 595 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 CRKP46108 304 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 RASA3Q14644 834 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 NBPF12Q5TAG4 269 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-219ENST00000494069 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
LRCH3-219ENST00000494069 ZNF70Q9UC06 446 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-219ENST00000494069 ANGEL1Q9UNK9 670 aaKnown RBP10.66□□□□□ -0.7
LRCH3-219ENST00000494069 CA12O43570 354 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 MYO1BO43795 1136 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 CIAO1O76071 339 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 SLC5A1P13866 664 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 ADORA1P30542 326 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 CACNB3P54284 484 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 LDLRAD1Q5T700 205 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 ATF7IPQ6VMQ6 1270 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 DZIP1LQ8IYY4 767 aaKnown RBP10.65□□□□□ -0.7
LRCH3-219ENST00000494069 LPIN2Q92539 896 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 CEP126Q9P2H0 1117 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 SERPINA10Q9UK55 444 aa10.65□□□□□ -0.7
LRCH3-219ENST00000494069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.65□□□□□ -0.7
LRCH3-219ENST00000494069 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.71
LRCH3-219ENST00000494069 COL1A1P02452 1464 aaPredicted RBP10.64□□□□□ -0.71
LRCH3-219ENST00000494069 TCP10L2B9ZVM9 353 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 IPO8O15397 1037 aaKnown RBP10.64□□□□□ -0.71
LRCH3-219ENST00000494069 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 ATP2B3Q16720 1220 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 TMEM57Q8N5G2 664 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 ABHD8Q96I13 439 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 CLMNQ96JQ2 1002 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
LRCH3-219ENST00000494069 USP2O75604 605 aaPredicted RBP10.63□□□□□ -0.71
LRCH3-219ENST00000494069 GNAI3P08754 354 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
LRCH3-219ENST00000494069 PHKA1P46020 1223 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 TIMM10P62072 90 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 TBC1D22AQ8WUA7 517 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 TEPSINQ96N21 525 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 PPP2R3BQ9Y5P8 575 aa10.63□□□□□ -0.71
LRCH3-219ENST00000494069 PNMA6EA0A0J9YXQ4 647 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 TBC1D8O95759 1140 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 RLBP1P12271 317 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 TFCP2Q12800 502 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 SUPT20HL1Q3ZLR7 823 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 SPRYD7Q5W111 196 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 ZKSCAN2Q63HK3 967 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
LRCH3-219ENST00000494069 ZDHHC15Q96MV8 337 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 MCOLN1Q9GZU1 580 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 HDAC5Q9UQL6 1122 aa10.62□□□□□ -0.71
LRCH3-219ENST00000494069 ECM29Q5VYK3 1845 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
LRCH3-219ENST00000494069 GNAI2P04899 355 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 PRDX5P30044 214 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 GJA5P36382 358 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 TM4SF4P48230 202 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
LRCH3-219ENST00000494069 MTX1Q13505 466 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 DGKZQ13574 1117 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 DIXDC1Q155Q3 683 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 C1orf115Q9H7X2 142 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
LRCH3-219ENST00000494069 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
LRCH3-219ENST00000494069 WNK4Q96J92 1243 aa10.6□□□□□ -0.71
LRCH3-219ENST00000494069 MRIQ9BWK5 157 aa10.6□□□□□ -0.71
LRCH3-219ENST00000494069 DAGLAQ9Y4D2 1042 aa10.6□□□□□ -0.71
LRCH3-219ENST00000494069 AKAP11Q9UKA4 1901 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 CCDC85CA6NKD9 419 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 TNFAIP1Q13829 316 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 RASGRF1Q13972 1273 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
LRCH3-219ENST00000494069 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms