RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
RFC4-214ENST00000494047 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
RFC4-214ENST00000494047 MAP3K15Q6ZN16 1313 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 MYH3P11055 1940 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 E7EWF7 191 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 GOLIM4O00461 696 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
RFC4-214ENST00000494047 ADRA2BP18089 450 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 ITPK1Q13572 414 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 GORABQ5T7V8 394 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
RFC4-214ENST00000494047 LINC00116Q8NCU8 138 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
RFC4-214ENST00000494047 CHMP3Q9Y3E7 222 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
RFC4-214ENST00000494047 MAST3O60307 1309 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
RFC4-214ENST00000494047 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 STK3Q13188 491 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
RFC4-214ENST00000494047 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
RFC4-214ENST00000494047 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 TIGD1Q96MW7 591 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
RFC4-214ENST00000494047 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
RFC4-214ENST00000494047 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
RFC4-214ENST00000494047 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
RFC4-214ENST00000494047 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 CPLX1O14810 134 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 GNPATO15228 680 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
RFC4-214ENST00000494047 NR1I2O75469 434 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 RCAN1P53805 252 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
RFC4-214ENST00000494047 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
RFC4-214ENST00000494047 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 WASF1Q92558 559 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
RFC4-214ENST00000494047 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
RFC4-214ENST00000494047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
RFC4-214ENST00000494047 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
RFC4-214ENST00000494047 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 STARD3NLO95772 234 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
RFC4-214ENST00000494047 ME1P48163 572 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 TCIRG1Q13488 830 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 LUZP1Q86V48 1076 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 PGBD1Q96JS3 809 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 FEZ1Q99689 392 aa13.35□□□□□ -0.27
RFC4-214ENST00000494047 JAK2O60674 1132 aa13.34□□□□□ -0.27
RFC4-214ENST00000494047 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
RFC4-214ENST00000494047 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
RFC4-214ENST00000494047 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
RFC4-214ENST00000494047 CAMK4Q16566 473 aa13.34□□□□□ -0.27
RFC4-214ENST00000494047 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
RFC4-214ENST00000494047 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
RFC4-214ENST00000494047 ATP5J2-PTCD1G3V325 749 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 ZNF213O14771 459 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 CBFA2T2O43439 604 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 IQCB1Q15051 598 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 STK38Q15208 465 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 UBE3CQ15386 1083 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 ENGASEQ8NFI3 743 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 FBXO18Q8NFZ0 1043 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 SYT17Q9BSW7 474 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 KCNF1Q9H3M0 494 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.27
RFC4-214ENST00000494047 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.27
RFC4-214ENST00000494047 STK36Q9NRP7 1315 aa13.33□□□□□ -0.28
RFC4-214ENST00000494047 NID2Q14112 1375 aa13.33□□□□□ -0.28
RFC4-214ENST00000494047 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
RFC4-214ENST00000494047 IKBKBO14920 756 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 PPP6R2O75170 966 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 CSF1RP07333 972 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 CCDC186Q7Z3E2 898 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 OSBPL5Q9H0X9 879 aaPredicted RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 CNNM2Q9H8M5 875 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms