RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
MCF2L-231ENST00000494043 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
MCF2L-231ENST00000494043 SUGT1Q9Y2Z0 365 aa13.73□□□□□ -0.21
MCF2L-231ENST00000494043 ZNF646O15015 1829 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-231ENST00000494043 SCN9AQ15858 1988 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 M0R2C6 588 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
MCF2L-231ENST00000494043 MECOMQ03112 1051 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 GRIK5Q16478 980 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 DACT2Q5SW24 774 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 NAA16Q6N069 864 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-231ENST00000494043 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-231ENST00000494043 CERS5Q8N5B7 392 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 UPF2Q9HAU5 1272 aaKnown RBP13.72□□□□□ -0.21
MCF2L-231ENST00000494043 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 ZNRF3Q9ULT6 936 aa13.72□□□□□ -0.21
MCF2L-231ENST00000494043 CYP7A1P22680 504 aa13.71□□□□□ -0.21
MCF2L-231ENST00000494043 PRELPP51888 382 aa13.71□□□□□ -0.21
MCF2L-231ENST00000494043 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
MCF2L-231ENST00000494043 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
MCF2L-231ENST00000494043 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
MCF2L-231ENST00000494043 PUS7LQ9H0K6 701 aaKnown RBP13.71□□□□□ -0.21
MCF2L-231ENST00000494043 PSME4Q14997 1843 aa13.71□□□□□ -0.22
MCF2L-231ENST00000494043 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
MCF2L-231ENST00000494043 GSTO1P78417 241 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 ADGRA1Q86SQ6 560 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
MCF2L-231ENST00000494043 GPAA1O43292 621 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 RAD17O75943 681 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 MBD4O95243 580 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 LMNB1P20700 586 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 AIDAQ96BJ3 306 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
MCF2L-231ENST00000494043 MROH7-TTC4A0A0A0MT08 1334 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 PSMD14O00487 310 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 LDHCP07864 332 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 VIL1P09327 827 aaKnown RBP13.68□□□□□ -0.22
MCF2L-231ENST00000494043 PTH1RQ03431 593 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-231ENST00000494043 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 MIGA1Q8NAN2 632 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
MCF2L-231ENST00000494043 C22orf23Q9BZE7 217 aa13.68□□□□□ -0.22
MCF2L-231ENST00000494043 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
MCF2L-231ENST00000494043 GAKO14976 1311 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 CXCL9Q07325 125 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 CIAPIN1Q6FI81 312 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-231ENST00000494043 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
MCF2L-231ENST00000494043 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 ARMT1Q9H993 441 aa13.67□□□□□ -0.22
MCF2L-231ENST00000494043 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-231ENST00000494043 FZD9O00144 591 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 FOXP2O15409 715 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
MCF2L-231ENST00000494043 RBM25P49756 843 aaKnown RBP13.66□□□□□ -0.22
MCF2L-231ENST00000494043 EIF6P56537 245 aaKnown RBP13.66□□□□□ -0.22
MCF2L-231ENST00000494043 DYNLL1P63167 89 aaKnown RBP13.66□□□□□ -0.22
MCF2L-231ENST00000494043 TNIP1Q15025 636 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 GPR162Q16538 588 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 KIAA0825Q8IV33 1275 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 MAP4K1Q92918 833 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 GMLQ99445 158 aa13.66□□□□□ -0.22
MCF2L-231ENST00000494043 DICER1Q9UPY3 1922 aaKnown RBP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 GNAT2P19087 354 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 MCCP23508 829 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 SCNN1DP51172 638 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 PPP4CP60510 307 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 HDLBPQ00341 1268 aaKnown RBP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 CERS3Q8IU89 383 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 AGBL3Q8NEM8 1001 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
MCF2L-231ENST00000494043 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-231ENST00000494043 ZNF541Q9H0D2 1346 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 MYH2Q9UKX2 1941 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 SBF1O95248 1867 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-231ENST00000494043 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 BAG3O95817 575 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 HSPA4P34932 840 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 BTDP43251 543 aa13.64□□□□□ -0.23
MCF2L-231ENST00000494043 CRKP46108 304 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms