RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 PUM3Q15397 648 aaKnown RBP12.76□□□□□ -0.37
COL2A1-208ENST00000493991 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
COL2A1-208ENST00000493991 GPR101Q96P66 508 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-208ENST00000493991 USP28Q96RU2 1077 aa12.76□□□□□ -0.37
COL2A1-208ENST00000493991 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
COL2A1-208ENST00000493991 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
COL2A1-208ENST00000493991 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
COL2A1-208ENST00000493991 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-208ENST00000493991 PLIN2Q99541 437 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 RICTORQ6R327 1708 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 H7C1W4 665 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-208ENST00000493991 PDE6AP16499 860 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 AOPEPQ8N6M6 819 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
COL2A1-208ENST00000493991 CUL4AQ13619 759 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 RTN1Q16799 776 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 SUSD4Q5VX71 490 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 STAMQ92783 540 aa12.75□□□□□ -0.37
COL2A1-208ENST00000493991 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL2A1-208ENST00000493991 PXDNQ92626 1479 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 MAGEB6P1A0A0J9YX57 407 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-208ENST00000493991 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
COL2A1-208ENST00000493991 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
COL2A1-208ENST00000493991 PDE8BO95263 885 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 NLRP5P59047 1200 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 SPTLC2O15270 562 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 MTX1Q13505 466 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 TPTE2Q6XPS3 522 aa12.74□□□□□ -0.37
COL2A1-208ENST00000493991 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-208ENST00000493991 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 LRMPQ12912 555 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 LPIN2Q92539 896 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
COL2A1-208ENST00000493991 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
COL2A1-208ENST00000493991 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 NOC3LQ8WTT2 800 aaKnown RBP12.73□□□□□ -0.37
COL2A1-208ENST00000493991 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-208ENST00000493991 RGS12O14924 1447 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 MCAMP43121 646 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 SYKP43405 635 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 TM6SF1Q9BZW5 370 aa12.73□□□□□ -0.37
COL2A1-208ENST00000493991 FOXO4P98177 505 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 PIH1D3Q9NQM4 214 aaKnown RBP12.72□□□□□ -0.37
COL2A1-208ENST00000493991 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 ANGEL1Q9UNK9 670 aaKnown RBP12.72□□□□□ -0.37
COL2A1-208ENST00000493991 STX17P56962 302 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 CHRNDQ07001 517 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
COL2A1-208ENST00000493991 CCDC94Q9BW85 323 aaPredicted RBP12.72□□□□□ -0.37
COL2A1-208ENST00000493991 ANO10Q9NW15 660 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 CABP5Q9NP86 173 aa12.72□□□□□ -0.37
COL2A1-208ENST00000493991 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
COL2A1-208ENST00000493991 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
COL2A1-208ENST00000493991 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
COL2A1-208ENST00000493991 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.37
COL2A1-208ENST00000493991 USP21Q9UK80 565 aa12.71□□□□□ -0.37
COL2A1-208ENST00000493991 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
COL2A1-208ENST00000493991 STOX1Q6ZVD7 989 aa12.71□□□□□ -0.37
COL2A1-208ENST00000493991 ESR2Q92731 530 aa12.71□□□□□ -0.37
COL2A1-208ENST00000493991 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
COL2A1-208ENST00000493991 USP17L12C9JPN9 530 aa12.71□□□□□ -0.38
COL2A1-208ENST00000493991 USP17L21D6R901 530 aa12.71□□□□□ -0.38
COL2A1-208ENST00000493991 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.38
COL2A1-208ENST00000493991 ERFEQ4G0M1 354 aa12.71□□□□□ -0.38
COL2A1-208ENST00000493991 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 RASGRF1Q13972 1273 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-208ENST00000493991 TPM3P06753 285 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
COL2A1-208ENST00000493991 PTPN14Q15678 1187 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 DHX58Q96C10 678 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 TTC14Q96N46 770 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 PYCARDQ9ULZ3 195 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 MAPK8IP1Q9UQF2 711 aa12.7□□□□□ -0.38
COL2A1-208ENST00000493991 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
COL2A1-208ENST00000493991 CCDC196A0A1B0GTZ2 297 aa12.69□□□□□ -0.38
COL2A1-208ENST00000493991 VPS54Q9P1Q0 977 aa12.69□□□□□ -0.38
COL2A1-208ENST00000493991 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
COL2A1-208ENST00000493991 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
COL2A1-208ENST00000493991 KRT40Q6A162 431 aa12.69□□□□□ -0.38
COL2A1-208ENST00000493991 IFNL3Q8IZI9 196 aa12.69□□□□□ -0.38
COL2A1-208ENST00000493991 ERCC3P19447 782 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms