RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	C19orf57	Q0VDD7	668 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	NFX1	Q12986	1120 aa	Known RBP	4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	GAS6	Q14393	721 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	FBXW10	Q5XX13	1052 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	AGMO	Q6ZNB7	445 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	PHC3	Q8NDX5	983 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	PMFBP1	Q8TBY8	1022 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	DHX38	Q92620	1227 aa	Known RBP	4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	TTC9	Q92623	222 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	JARID2	Q92833	1246 aa	Predicted RBP	4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	KCNB2	Q92953	911 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	NKD1	Q969G9	470 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	SEC16B	Q96JE7	1060 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	FERD3L	Q96RJ6	166 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	CRBN	Q96SW2	442 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	DNAJC2	Q99543	621 aa	Known RBP	4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	NAGPA	Q9UK23	515 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855	TLR6	Q9Y2C9	796 aa		4.54	□□□□□ -1.68
CCT6A-208	ENST00000493855		M0R082	166 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	TERT	O14746	1132 aa	Known RBP	4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ADAMTS2	O95450	1211 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ESRRA	P11474	423 aa	Predicted RBP	4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ATF4	P18848	351 aa	Predicted RBP	4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	EPHA1	P21709	976 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ARNT	P27540	789 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	FAAP100	Q0VG06	881 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	MLEC	Q14165	292 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	PDE3A	Q14432	1141 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	CCDC84	Q86UT8	332 aa	Predicted RBP	4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	MAP4K3	Q8IVH8	894 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	TRIM42	Q8IWZ5	723 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	GALNT6	Q8NCL4	622 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ZNF417	Q8TAU3	575 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	RASGRP4	Q8TDF6	673 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	EDARADD	Q8WWZ3	215 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	WNT8B	Q93098	351 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	RHOV	Q96L33	236 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	NT5C1A	Q9BXI3	368 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	TRIM55	Q9BYV6	548 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	RRAGC	Q9HB90	399 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	PICK1	Q9NRD5	415 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ADAMTS1	Q9UHI8	967 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	EFR3B	Q9Y2G0	817 aa		4.53	□□□□□ -1.68
CCT6A-208	ENST00000493855	ROBO2	Q9HCK4	1378 aa		4.53	□□□□□ -1.69
CCT6A-208	ENST00000493855	LINC01387	J3KSC0	135 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	PIK3R2	O00459	728 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	TLR3	O15455	904 aa	Known RBP	4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	PAGE1	O75459	146 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	VSIG8	P0DPA2	414 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	EPX	P11678	715 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	TFE3	P19532	575 aa	Predicted RBP	4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	ZNF165	P49910	485 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	MPP2	Q14168	576 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	SEZ6	Q53EL9	994 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	MAP1S	Q66K74	1059 aa	Predicted RBP	4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	SCARA3	Q6AZY7	606 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	FBXL19	Q6PCT2	694 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	TXNDC11	Q6PKC3	985 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	CHSY3	Q70JA7	882 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	VN1R5	Q7Z5H4	357 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	NEDD1	Q8NHV4	660 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	GML	Q99445	158 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	USP26	Q9BXU7	913 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	SOX17	Q9H6I2	414 aa	Predicted RBP	4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	OSGEP	Q9NPF4	335 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	ENAM	Q9NRM1	1142 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	UBP1	Q9NZI7	540 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	KLF15	Q9UIH9	416 aa		4.52	□□□□□ -1.69
CCT6A-208	ENST00000493855	SPDYE3	A6NKU9	549 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	ALB	P02768	609 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	GSTP1	P09211	210 aa	Known RBP	4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	BCR	P11274	1271 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	IMPDH2	P12268	514 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	SEPT6	Q14141	434 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	POU4F3	Q15319	338 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	ZNF423	Q2M1K9	1284 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	MSL1	Q68DK7	614 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	FAM196A	Q6ZSG2	479 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	GPR161	Q8N6U8	529 aa	Known RBP	4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	KLHL23	Q8NBE8	558 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	GATAD2B	Q8WXI9	593 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	ELMO3	Q96BJ8	720 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	ANAPC16	Q96DE5	110 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	EAF1	Q96JC9	268 aa	Predicted RBP	4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	RAD18	Q9NS91	495 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	GINM1	Q9NU53	330 aa		4.51	□□□□□ -1.69
CCT6A-208	ENST00000493855	SOX1	O00570	391 aa	Predicted RBP	4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	FSCN2	O14926	492 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	OIP5	O43482	229 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	TRIM37	O94972	964 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	FGR	P09769	529 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	AFF1	P51825	1210 aa	Known RBP	4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	RAC1	P63000	192 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	TNNI3K	Q59H18	835 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	RNFT1	Q5M7Z0	435 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	TRAPPC3L	Q5T215	181 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	MCF2L2	Q86YR7	1114 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	ACD	Q96AP0	544 aa		4.5	□□□□□ -1.69
CCT6A-208	ENST00000493855	SRRT	Q9BXP5	876 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms