RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
TRIM50-204ENST00000493498 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
TRIM50-204ENST00000493498 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
TRIM50-204ENST00000493498 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
TRIM50-204ENST00000493498 NBPF12Q5TAG4 269 aaPredicted RBP16.95■□□□□ 0.3
TRIM50-204ENST00000493498 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
TRIM50-204ENST00000493498 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
TRIM50-204ENST00000493498 SMC4Q9NTJ3 1288 aa16.95■□□□□ 0.3
TRIM50-204ENST00000493498 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
TRIM50-204ENST00000493498 UTYO14607 1347 aa16.95■□□□□ 0.3
TRIM50-204ENST00000493498 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-204ENST00000493498 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
TRIM50-204ENST00000493498 ARHGEF6Q15052 776 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
TRIM50-204ENST00000493498 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 TRIM17Q9Y577 477 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
TRIM50-204ENST00000493498 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
TRIM50-204ENST00000493498 IGF2BP3O00425 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIM50-204ENST00000493498 GYG1P46976 350 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
TRIM50-204ENST00000493498 HOOK2Q96ED9 719 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 OTOFQ9HC10 1997 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 PTPRCP08575 1304 aa16.93■□□□□ 0.3
TRIM50-204ENST00000493498 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-204ENST00000493498 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-204ENST00000493498 CRKP46108 304 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 AAMPQ13685 434 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 RABL6Q3YEC7 729 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-204ENST00000493498 OTOP1Q7RTM1 612 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 R3HDMLQ9H3Y0 253 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
TRIM50-204ENST00000493498 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-204ENST00000493498 RIPOR2Q9Y4F9 1068 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 MAST3O60307 1309 aa16.92■□□□□ 0.3
TRIM50-204ENST00000493498 METTL24Q5JXM2 366 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 ATF7IPQ6VMQ6 1270 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 OPTNQ96CV9 577 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 MRIQ9BWK5 157 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 SUGT1Q9Y2Z0 365 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 CSADQ9Y600 493 aa16.91■□□□□ 0.3
TRIM50-204ENST00000493498 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
TRIM50-204ENST00000493498 GTF2A2P52657 109 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 SP3Q02447 781 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 CRHR2Q13324 411 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 KAZALD1Q96I82 304 aa16.9■□□□□ 0.3
TRIM50-204ENST00000493498 PUS3Q9BZE2 481 aaKnown RBP16.9■□□□□ 0.3
TRIM50-204ENST00000493498 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
TRIM50-204ENST00000493498 KIAA0100Q14667 2235 aaKnown RBP16.9■□□□□ 0.3
TRIM50-204ENST00000493498 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.3
TRIM50-204ENST00000493498 PDE8BO95263 885 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 FKBP1CQ5VVH2 108 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 GCC1Q96CN9 775 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 API5Q9BZZ5 524 aaKnown RBP16.89■□□□□ 0.29
TRIM50-204ENST00000493498 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 EFCC1Q9HA90 598 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
TRIM50-204ENST00000493498 AOX1Q06278 1338 aa16.89■□□□□ 0.29
TRIM50-204ENST00000493498 TCP10L2B9ZVM9 353 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
TRIM50-204ENST00000493498 GJA5P36382 358 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 ZFYVE28Q9HCC9 887 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 MYH13Q9UKX3 1938 aa16.88■□□□□ 0.29
TRIM50-204ENST00000493498 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 PUM3Q15397 648 aaKnown RBP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
TRIM50-204ENST00000493498 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 MS4A4AQ96JQ5 239 aa16.87■□□□□ 0.29
TRIM50-204ENST00000493498 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
TRIM50-204ENST00000493498 ZCCHC17Q9NP64 241 aaKnown RBP16.87■□□□□ 0.29
TRIM50-204ENST00000493498 CCL15-CCL14A0A0B4J2E2 113 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 TRIM27P14373 513 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 VGLL4Q14135 290 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
TRIM50-204ENST00000493498 CCL15Q16663 113 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 ANKRD44Q8N8A2 993 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 ARMC5Q96C12 935 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 PTPN18Q99952 460 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 TMEM39BQ9GZU3 492 aa16.86■□□□□ 0.29
TRIM50-204ENST00000493498 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
TRIM50-204ENST00000493498 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
TRIM50-204ENST00000493498 LRRC24Q50LG9 513 aa16.85■□□□□ 0.29
TRIM50-204ENST00000493498 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
TRIM50-204ENST00000493498 WDR66Q8TBY9 1149 aa16.85■□□□□ 0.29
TRIM50-204ENST00000493498 CETPP11597 493 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms