RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 HIP1O00291 1037 aa13.98□□□□□ -0.17
LSM2-214ENST00000493387 MAP4K4O95819 1239 aaPredicted RBP13.98□□□□□ -0.17
LSM2-214ENST00000493387 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
LSM2-214ENST00000493387 LMOD1P29536 600 aaPredicted RBP13.98□□□□□ -0.17
LSM2-214ENST00000493387 PRDX5P30044 214 aa13.98□□□□□ -0.17
LSM2-214ENST00000493387 GMPSP49915 693 aaPredicted RBP13.98□□□□□ -0.17
LSM2-214ENST00000493387 EDC3Q96F86 508 aaKnown RBP13.98□□□□□ -0.17
LSM2-214ENST00000493387 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
LSM2-214ENST00000493387 PSME4Q14997 1843 aa13.98□□□□□ -0.17
LSM2-214ENST00000493387 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 H7C1D1 291 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 DDNO94850 711 aaPredicted RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 SDSP20132 328 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 SKAP1Q86WV1 359 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 SERPINA10Q9UK55 444 aa13.97□□□□□ -0.17
LSM2-214ENST00000493387 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
LSM2-214ENST00000493387 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 F8W031 263 aaPredicted RBP13.96□□□□□ -0.17
LSM2-214ENST00000493387 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
LSM2-214ENST00000493387 ZNF280AP59817 542 aaPredicted RBP13.96□□□□□ -0.17
LSM2-214ENST00000493387 MECOMQ03112 1051 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 NSUN4Q96CB9 384 aaKnown RBP13.96□□□□□ -0.17
LSM2-214ENST00000493387 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.17
LSM2-214ENST00000493387 IQCA1LA6NCM1 817 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 PDE6AP16499 860 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 CYP7A1P22680 504 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 ADD2P35612 726 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 GRIK5Q16478 980 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 MAGEB6Q8N7X4 407 aa13.95□□□□□ -0.18
LSM2-214ENST00000493387 NOL10Q9BSC4 688 aaKnown RBP13.95□□□□□ -0.18
LSM2-214ENST00000493387 BAG3O95817 575 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 CRKP46108 304 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 SCNN1DP51172 638 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 MTMR14Q8NCE2 650 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 DIAPH3Q9NSV4 1193 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 HACL1Q9UJ83 578 aa13.94□□□□□ -0.18
LSM2-214ENST00000493387 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 GAKO14976 1311 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 PLCG2P16885 1265 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 RBM5P52756 815 aaKnown RBP eCLIP13.93□□□□□ -0.18
LSM2-214ENST00000493387 CFAP100Q494V2 611 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 RUFY2Q8WXA3 655 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 APPBP2Q92624 585 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 MYOZ2Q9NPC6 264 aa13.93□□□□□ -0.18
LSM2-214ENST00000493387 ADARB2Q9NS39 739 aaKnown RBP13.93□□□□□ -0.18
LSM2-214ENST00000493387 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 GPR75-ASB3A0A0A6YYF3 556 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 TCRBV5S4A2TA0A5A2 114 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 MYO1BO43795 1136 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 PPP4CP60510 307 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 DIXDC1Q155Q3 683 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 HELLSQ9NRZ9 838 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 DAGLAQ9Y4D2 1042 aa13.92□□□□□ -0.18
LSM2-214ENST00000493387 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
LSM2-214ENST00000493387 EIF5BO60841 1220 aaKnown RBP13.91□□□□□ -0.18
LSM2-214ENST00000493387 CDC45O75419 566 aa13.91□□□□□ -0.18
LSM2-214ENST00000493387 VEGFAP15692 232 aaPredicted RBP13.91□□□□□ -0.18
LSM2-214ENST00000493387 CHMLP26374 656 aa13.91□□□□□ -0.18
LSM2-214ENST00000493387 EPS15P42566 896 aa13.91□□□□□ -0.18
LSM2-214ENST00000493387 MFAP1P55081 439 aaKnown RBP13.91□□□□□ -0.18
LSM2-214ENST00000493387 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
LSM2-214ENST00000493387 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
LSM2-214ENST00000493387 DOCK2Q92608 1830 aa13.91□□□□□ -0.18
LSM2-214ENST00000493387 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 EPHX2P34913 555 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 BTDP43251 543 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
LSM2-214ENST00000493387 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
LSM2-214ENST00000493387 TMOD2Q9NZR1 351 aa13.9□□□□□ -0.18
LSM2-214ENST00000493387 RAD50Q92878 1312 aa13.9□□□□□ -0.19
LSM2-214ENST00000493387 GNAT2P19087 354 aa13.89□□□□□ -0.19
LSM2-214ENST00000493387 NMIQ13287 307 aaPredicted RBP13.89□□□□□ -0.19
LSM2-214ENST00000493387 TBC1D10BQ4KMP7 808 aaPredicted RBP13.89□□□□□ -0.19
LSM2-214ENST00000493387 RBM26Q5T8P6 1007 aaKnown RBP13.89□□□□□ -0.19
LSM2-214ENST00000493387 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms