RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 WASHC2CQ9Y4E1 1318 aa4.97□□□□□ -1.61
BRCA1-220ENST00000492859 IQCA1LA6NCM1 817 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 GOLGA6L3A6NEY3 463 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 FAM25EA8MYX2 175 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 SORBS3O60504 671 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ARIH2O95376 493 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 F2P00734 622 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 RAC2P15153 192 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ATF4P18848 351 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 VARSP26640 1264 aaKnown RBP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 NEK3P51956 506 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 UBASH3AP57075 661 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ARHGAP4P98171 946 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ROR1Q01973 937 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 BIRC3Q13489 604 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 SLMAPQ14BN4 828 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 IL31Q6EBC2 164 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 TMC4Q7Z404 712 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 MAATS1Q7Z4T9 603 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 PNMA8AQ86V59 439 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 VPS37DQ86XT2 251 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 STK11IPQ8N1F8 1099 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ATXN2LQ8WWM7 1075 aaKnown RBP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 APPBP2Q92624 585 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 HVCN1Q96D96 273 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 LRCH3Q96II8 777 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 CDK5RAP3Q96JB5 506 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 FEZ1Q99689 392 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 VPS33BQ9H267 617 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 MRS2Q9HD23 443 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 SEL1LQ9UBV2 794 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 VTI1BQ9UEU0 232 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 GTF3C4Q9UKN8 822 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 ZHX1Q9UKY1 873 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-220ENST00000492859 MKL2Q9ULH7 1088 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 TPCN1Q9ULQ1 816 aa4.96□□□□□ -1.62
BRCA1-220ENST00000492859 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 KCNQ2O43526 872 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DNAJB2P25686 324 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 SERPINB3P29508 390 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 STT3AP46977 705 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 RBM5P52756 815 aaKnown RBP eCLIP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 UBXN2AP68543 259 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DDX10Q13206 875 aaKnown RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CRTC2Q53ET0 693 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 PLBD1Q6P4A8 553 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CYP26C1Q6V0L0 522 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CCDC129Q6ZRS4 1044 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 RTL10Q7L3V2 364 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 KRT26Q7Z3Y9 468 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 ZNF354CQ86Y25 554 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 ZNF654Q8IZM8 581 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 LILRB2Q8N423 598 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 TEX9Q8N6V9 391 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 KLHL23Q8NBE8 558 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 WDR66Q8TBY9 1149 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 FBXO41Q8TF61 875 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 EYA1Q99502 592 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 RPAP3Q9H6T3 665 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DIAPH3Q9NSV4 1193 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 SAGE1Q9NXZ1 904 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 ZIM2Q9NZV7 527 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 PPP1R9AQ9ULJ8 1098 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 MAGED1Q9Y5V3 778 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 FAM170AA1A519 330 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 FOXN3O00409 490 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CPLX1O14810 134 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 SLC27A2O14975 620 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 AKAP10O43572 662 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 NBNO60934 754 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 RNF40O75150 1001 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 AGR2O95994 175 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 MSL3P1P0C860 447 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 ATF7P17544 494 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 HTR3AP46098 478 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 SH3BGRP55822 239 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 HSD17B7P56937 341 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CLDN10P78369 228 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 COX10Q12887 443 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 LAMC2Q13753 1193 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 PKN2Q16513 984 aaKnown RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DACT2Q5SW24 774 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 SWT1Q5T5J6 900 aaKnown RBP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 TTLL5Q6EMB2 1281 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 MZT2AQ6P582 158 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 CTR9Q6PD62 1173 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 TAX1BP1Q86VP1 789 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DGKHQ86XP1 1220 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 DDX42Q86XP3 938 aaKnown RBP eCLIP4.95□□□□□ -1.62
BRCA1-220ENST00000492859 C1orf216Q8TAB5 229 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 C17orf50Q8WW18 174 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 NLRP7Q8WX94 980 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 UROC1Q96N76 676 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 NUDT12Q9BQG2 462 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 HERPUD2Q9BSE4 406 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 AP1M1Q9BXS5 423 aa4.95□□□□□ -1.62
BRCA1-220ENST00000492859 EPB41L4AQ9HCS5 686 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms