RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OTUD7BQ6GQQ9 843 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 ANKRD13AQ8IZ07 590 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 HOOK2Q96ED9 719 aa15.55■□□□□ 0.08
COL6A1-205ENST00000492851 IPO8O15397 1037 aaKnown RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 FGFR2P21802 821 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 BCAMP50895 628 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 MLLT1Q03111 559 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 CHAF1AQ13111 956 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 NBPF12Q5TAG4 269 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 WDR66Q8TBY9 1149 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 TDRD3Q9H7E2 651 aaKnown RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
COL6A1-205ENST00000492851 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 CEP126Q9P2H0 1117 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 PCDHAC2Q9Y5I4 1007 aa15.54■□□□□ 0.08
COL6A1-205ENST00000492851 USP2O75604 605 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-205ENST00000492851 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
COL6A1-205ENST00000492851 RFX5P48382 616 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-205ENST00000492851 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
COL6A1-205ENST00000492851 ZDHHC15Q96MV8 337 aa15.53■□□□□ 0.08
COL6A1-205ENST00000492851 A0A1B0GUL6 1792 aa15.53■□□□□ 0.08
COL6A1-205ENST00000492851 GPR25O00155 361 aa15.52■□□□□ 0.08
COL6A1-205ENST00000492851 GNAI3P08754 354 aa15.52■□□□□ 0.08
COL6A1-205ENST00000492851 IL15P40933 162 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-205ENST00000492851 RARSP54136 660 aaKnown RBP15.52■□□□□ 0.08
COL6A1-205ENST00000492851 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.08
COL6A1-205ENST00000492851 ZNF296Q8WUU4 475 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-205ENST00000492851 WNK4Q96J92 1243 aa15.52■□□□□ 0.08
COL6A1-205ENST00000492851 IQSEC3Q9UPP2 1182 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-205ENST00000492851 AKAP11Q9UKA4 1901 aa15.52■□□□□ 0.07
COL6A1-205ENST00000492851 HHIPL2Q6UWX4 724 aa15.51■□□□□ 0.07
COL6A1-205ENST00000492851 FAM83AQ86UY5 434 aa15.51■□□□□ 0.07
COL6A1-205ENST00000492851 TCP10L2B9ZVM9 353 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 SEMA3EO15041 775 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 ZBTB22O15209 634 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 FKTNO75072 461 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
COL6A1-205ENST00000492851 ATG9AQ7Z3C6 839 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 IFNL1Q8IU54 200 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 TEPSINQ96N21 525 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 COPRSQ9NQ92 184 aa15.5■□□□□ 0.07
COL6A1-205ENST00000492851 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 MAP3K9P80192 1104 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 CLMNQ96JQ2 1002 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 FZD1Q9UP38 647 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 CSADQ9Y600 493 aa15.49■□□□□ 0.07
COL6A1-205ENST00000492851 LRRFIP2Q9Y608 721 aaKnown RBP15.49■□□□□ 0.07
COL6A1-205ENST00000492851 AOX1Q06278 1338 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 TESPA1A2RU30 521 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-205ENST00000492851 APOBEC3HQ6NTF7 200 aaKnown RBP15.48■□□□□ 0.07
COL6A1-205ENST00000492851 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
COL6A1-205ENST00000492851 TMEM39BQ9GZU3 492 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 SIL1Q9H173 461 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-205ENST00000492851 DENND2AQ9ULE3 1009 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 SSC5DA1L4H1 1573 aa15.48■□□□□ 0.07
COL6A1-205ENST00000492851 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
COL6A1-205ENST00000492851 WDHD1O75717 1129 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-205ENST00000492851 GRIK5Q16478 980 aa15.47■□□□□ 0.07
COL6A1-205ENST00000492851 DCAF15Q66K64 600 aa15.47■□□□□ 0.07
COL6A1-205ENST00000492851 FBXO46Q6PJ61 603 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-205ENST00000492851 OPTNQ96CV9 577 aa15.47■□□□□ 0.07
COL6A1-205ENST00000492851 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
COL6A1-205ENST00000492851 GTF2A2P52657 109 aa15.46■□□□□ 0.07
COL6A1-205ENST00000492851 SLF2Q8IX21 1173 aa15.46■□□□□ 0.07
COL6A1-205ENST00000492851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL6A1-205ENST00000492851 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
COL6A1-205ENST00000492851 HPS5Q9UPZ3 1129 aa15.46■□□□□ 0.07
COL6A1-205ENST00000492851 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 SRGAP3O43295 1099 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 MTX1Q13505 466 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 ARHGEF6Q15052 776 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-205ENST00000492851 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 MEIS3Q99687 375 aa15.45■□□□□ 0.06
COL6A1-205ENST00000492851 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL6A1-205ENST00000492851 GNAI2P04899 355 aa15.44■□□□□ 0.06
COL6A1-205ENST00000492851 VGLL4Q14135 290 aa15.44■□□□□ 0.06
COL6A1-205ENST00000492851 SPTY2D1Q68D10 685 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-205ENST00000492851 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
COL6A1-205ENST00000492851 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
COL6A1-205ENST00000492851 CACNB3P54284 484 aa15.43■□□□□ 0.06
COL6A1-205ENST00000492851 MVPQ14764 893 aaKnown RBP15.43■□□□□ 0.06
COL6A1-205ENST00000492851 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
COL6A1-205ENST00000492851 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
COL6A1-205ENST00000492851 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
COL6A1-205ENST00000492851 RPAP1Q9BWH6 1393 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-205ENST00000492851 PDS5AQ29RF7 1337 aaKnown RBP15.43■□□□□ 0.06
COL6A1-205ENST00000492851 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 GJA5P36382 358 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
COL6A1-205ENST00000492851 MS4A4AQ96JQ5 239 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 PTPN18Q99952 460 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 R3HDMLQ9H3Y0 253 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms