RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
TMC1-205ENST00000492418 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
TMC1-205ENST00000492418 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
TMC1-205ENST00000492418 PITPNM2Q9BZ72 1349 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
TMC1-205ENST00000492418 VEZTQ9HBM0 779 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 SNRKQ9NRH2 765 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
TMC1-205ENST00000492418 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
TMC1-205ENST00000492418 TRAF5O00463 557 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
TMC1-205ENST00000492418 LDHCP07864 332 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 NF2P35240 595 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 TNNI2P48788 182 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 GSTO1P78417 241 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 HHIPL2Q6UWX4 724 aa13.65□□□□□ -0.22
TMC1-205ENST00000492418 PRMT6Q96LA8 375 aaPredicted RBP13.65□□□□□ -0.22
TMC1-205ENST00000492418 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
TMC1-205ENST00000492418 ABT1Q9ULW3 272 aaKnown RBP13.65□□□□□ -0.22
TMC1-205ENST00000492418 ASTN2O75129 1339 aaPredicted RBP13.64□□□□□ -0.23
TMC1-205ENST00000492418 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 ADM5C9JUS6 153 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 MCAMP43121 646 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 IRX6P78412 446 aaPredicted RBP13.64□□□□□ -0.23
TMC1-205ENST00000492418 GRIK5Q16478 980 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
TMC1-205ENST00000492418 TLR7Q9NYK1 1049 aaKnown RBP13.64□□□□□ -0.23
TMC1-205ENST00000492418 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
TMC1-205ENST00000492418 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
TMC1-205ENST00000492418 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
TMC1-205ENST00000492418 PRDX5P30044 214 aa13.63□□□□□ -0.23
TMC1-205ENST00000492418 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
TMC1-205ENST00000492418 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
TMC1-205ENST00000492418 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
TMC1-205ENST00000492418 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
TMC1-205ENST00000492418 ZDHHC15Q96MV8 337 aa13.63□□□□□ -0.23
TMC1-205ENST00000492418 TDRD3Q9H7E2 651 aaKnown RBP13.63□□□□□ -0.23
TMC1-205ENST00000492418 IGSF3O75054 1194 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
TMC1-205ENST00000492418 TTF1Q15361 905 aaPredicted RBP13.62□□□□□ -0.23
TMC1-205ENST00000492418 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
TMC1-205ENST00000492418 CDCA5Q96FF9 252 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 DEFB129Q9H1M3 183 aa13.62□□□□□ -0.23
TMC1-205ENST00000492418 ZNF70Q9UC06 446 aaPredicted RBP13.62□□□□□ -0.23
TMC1-205ENST00000492418 ZAP70P43403 619 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 MECOMQ03112 1051 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 MAP3K12Q12852 859 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 SCAF8Q9UPN6 1271 aaKnown RBP13.61□□□□□ -0.23
TMC1-205ENST00000492418 PCDHAC2Q9Y5I4 1007 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 PPP2R3BQ9Y5P8 575 aa13.61□□□□□ -0.23
TMC1-205ENST00000492418 COL1A1P02452 1464 aaPredicted RBP13.61□□□□□ -0.23
TMC1-205ENST00000492418 ZNF646O15015 1829 aaPredicted RBP13.6□□□□□ -0.23
TMC1-205ENST00000492418 TCP10L2B9ZVM9 353 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 IDH1O75874 414 aaKnown RBP13.6□□□□□ -0.23
TMC1-205ENST00000492418 BAG3O95817 575 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 NEFLP07196 543 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMC1-205ENST00000492418 RASA3Q14644 834 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 CST9Q5W186 159 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 NAA16Q6N069 864 aaPredicted RBP13.6□□□□□ -0.23
TMC1-205ENST00000492418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMC1-205ENST00000492418 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
TMC1-205ENST00000492418 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
TMC1-205ENST00000492418 ECHDC1Q9NTX5 307 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 USP40Q9NVE5 1235 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
TMC1-205ENST00000492418 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
TMC1-205ENST00000492418 ATP5JP18859 108 aa13.59□□□□□ -0.23
TMC1-205ENST00000492418 HTRA3P83110 453 aa13.59□□□□□ -0.23
TMC1-205ENST00000492418 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
TMC1-205ENST00000492418 APOBEC3HQ6NTF7 200 aaKnown RBP13.59□□□□□ -0.23
TMC1-205ENST00000492418 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
TMC1-205ENST00000492418 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
TMC1-205ENST00000492418 GOLIM4O00461 696 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 ERC2O15083 957 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 PPP1R12BO60237 982 aaPredicted RBP13.58□□□□□ -0.24
TMC1-205ENST00000492418 ECE1P42892 770 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 HUNKP57058 714 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 FKBP1BP68106 108 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 FKBP1CQ5VVH2 108 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.24
TMC1-205ENST00000492418 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms