RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
TOM1-215ENST00000491987 ARMC9Q7Z3E5 817 aa18.65■□□□□ 0.58
TOM1-215ENST00000491987 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
TOM1-215ENST00000491987 TDRD3Q9H7E2 651 aaKnown RBP18.65■□□□□ 0.58
TOM1-215ENST00000491987 FZD1Q9UP38 647 aa18.65■□□□□ 0.58
TOM1-215ENST00000491987 GNAI2P04899 355 aa18.64■□□□□ 0.57
TOM1-215ENST00000491987 ZNF70Q9UC06 446 aaPredicted RBP18.64■□□□□ 0.57
TOM1-215ENST00000491987 ANGEL1Q9UNK9 670 aaKnown RBP18.64■□□□□ 0.57
TOM1-215ENST00000491987 RASA3Q14644 834 aa18.63■□□□□ 0.57
TOM1-215ENST00000491987 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
TOM1-215ENST00000491987 MYH13Q9UKX3 1938 aa18.62■□□□□ 0.57
TOM1-215ENST00000491987 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
TOM1-215ENST00000491987 TEKT1Q969V4 418 aa18.62■□□□□ 0.57
TOM1-215ENST00000491987 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 ADORA1P30542 326 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 PHKA1P46020 1223 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 HDLBPQ00341 1268 aaKnown RBP18.61■□□□□ 0.57
TOM1-215ENST00000491987 TFCP2Q12800 502 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
TOM1-215ENST00000491987 TNFAIP1Q13829 316 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 FTSJ3Q8IY81 847 aaKnown RBP18.61■□□□□ 0.57
TOM1-215ENST00000491987 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
TOM1-215ENST00000491987 GNL3LQ9NVN8 582 aaKnown RBP18.61■□□□□ 0.57
TOM1-215ENST00000491987 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
TOM1-215ENST00000491987 MAST3O60307 1309 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 TCP10L2B9ZVM9 353 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
TOM1-215ENST00000491987 SUPT20HL1Q3ZLR7 823 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 LDLRAD1Q5T700 205 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 RNF186Q9NXI6 227 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 SAGE1Q9NXZ1 904 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 SUGT1Q9Y2Z0 365 aa18.6■□□□□ 0.57
TOM1-215ENST00000491987 TRPA1O75762 1119 aa18.59■□□□□ 0.57
TOM1-215ENST00000491987 TIMM10P62072 90 aa18.59■□□□□ 0.57
TOM1-215ENST00000491987 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
TOM1-215ENST00000491987 ZDHHC15Q96MV8 337 aa18.59■□□□□ 0.57
TOM1-215ENST00000491987 A0A1B0GUL7 405 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 RLBP1P12271 317 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 CACNB3P54284 484 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 MAP3K11Q16584 847 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 CCDC102BQ68D86 513 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 REM2Q8IYK8 340 aaPredicted RBP18.58■□□□□ 0.56
TOM1-215ENST00000491987 MRIQ9BWK5 157 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 TMEM39BQ9GZU3 492 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 C1orf115Q9H7X2 142 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 AKAP2Q9Y2D5 859 aa18.58■□□□□ 0.56
TOM1-215ENST00000491987 SEMA3EO15041 775 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 PRDX5P30044 214 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 TNNI2P48788 182 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 HHIPL2Q6UWX4 724 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 CLMNQ96JQ2 1002 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 TEPSINQ96N21 525 aa18.57■□□□□ 0.56
TOM1-215ENST00000491987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
TOM1-215ENST00000491987 USP2O75604 605 aaPredicted RBP18.56■□□□□ 0.56
TOM1-215ENST00000491987 IREB2P48200 963 aaKnown RBP18.56■□□□□ 0.56
TOM1-215ENST00000491987 G3BP1Q13283 466 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■□□□ 14.1
TOM1-215ENST00000491987 DIXDC1Q155Q3 683 aa18.56■□□□□ 0.56
TOM1-215ENST00000491987 APOBEC3HQ6NTF7 200 aaKnown RBP18.56■□□□□ 0.56
TOM1-215ENST00000491987 SLC10A4Q96EP9 437 aa18.56■□□□□ 0.56
TOM1-215ENST00000491987 XAGE2Q96GT9 111 aa18.56■□□□□ 0.56
TOM1-215ENST00000491987 TMOD2Q9NZR1 351 aa18.56■□□□□ 0.56
TOM1-215ENST00000491987 AKAP11Q9UKA4 1901 aa18.56■□□□□ 0.56
TOM1-215ENST00000491987 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
TOM1-215ENST00000491987 LDHBP07195 334 aaKnown RBP18.55■□□□□ 0.56
TOM1-215ENST00000491987 SPRYD7Q5W111 196 aa18.55■□□□□ 0.56
TOM1-215ENST00000491987 NEUROD6Q96NK8 337 aa18.55■□□□□ 0.56
TOM1-215ENST00000491987 RASGRF1Q13972 1273 aa18.54■□□□□ 0.56
TOM1-215ENST00000491987 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
TOM1-215ENST00000491987 DAGLAQ9Y4D2 1042 aa18.54■□□□□ 0.56
TOM1-215ENST00000491987 OTOFQ9HC10 1997 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 ZBTB7BO15156 539 aaPredicted RBP18.53■□□□□ 0.56
TOM1-215ENST00000491987 TM4SF4P48230 202 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 ATP8B2P98198 1209 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 SREBF2Q12772 1141 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 POLA2Q14181 598 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 ABHD8Q96I13 439 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 WNK4Q96J92 1243 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
TOM1-215ENST00000491987 UNCXA6NJT0 531 aa18.52■□□□□ 0.56
TOM1-215ENST00000491987 ZBTB22O15209 634 aa18.52■□□□□ 0.56
TOM1-215ENST00000491987 GORABQ5T7V8 394 aa18.52■□□□□ 0.56
TOM1-215ENST00000491987 ZGPATQ8N5A5 531 aaKnown RBP18.52■□□□□ 0.56
TOM1-215ENST00000491987 SSH3Q8TE77 659 aa18.52■□□□□ 0.56
TOM1-215ENST00000491987 ABCF2Q9UG63 623 aa18.52■□□□□ 0.56
TOM1-215ENST00000491987 ZBTB48P10074 688 aaPredicted RBP18.51■□□□□ 0.55
TOM1-215ENST00000491987 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
TOM1-215ENST00000491987 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
TOM1-215ENST00000491987 FAM83AQ86UY5 434 aa18.51■□□□□ 0.55
TOM1-215ENST00000491987 PDS5AQ29RF7 1337 aaKnown RBP18.5■□□□□ 0.55
TOM1-215ENST00000491987 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
TOM1-215ENST00000491987 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
TOM1-215ENST00000491987 DGKZQ13574 1117 aa18.5■□□□□ 0.55
TOM1-215ENST00000491987 CDC42EP5Q6NZY7 148 aa18.5■□□□□ 0.55
TOM1-215ENST00000491987 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
TOM1-215ENST00000491987 MCOLN1Q9GZU1 580 aa18.5■□□□□ 0.55
TOM1-215ENST00000491987 ELP3Q9H9T3 547 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms