RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 LRP2BPQ9P2M1 347 aa28.3■■■□□ 2.12
SCN5A-213ENST00000491944 MAST3O60307 1309 aa28.29■■■□□ 2.12
SCN5A-213ENST00000491944 PDE1AP54750 535 aa28.29■■■□□ 2.12
SCN5A-213ENST00000491944 EAPPQ56P03 285 aaPredicted RBP28.29■■■□□ 2.12
SCN5A-213ENST00000491944 TRPM4Q8TD43 1214 aa28.29■■■□□ 2.12
SCN5A-213ENST00000491944 GOLIM4O00461 696 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 GLRX3O76003 335 aaKnown RBP28.28■■■□□ 2.12
SCN5A-213ENST00000491944 MMP14P50281 582 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 KIF4BQ2VIQ3 1234 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 DZIP1Q86YF9 867 aaKnown RBP28.28■■■□□ 2.12
SCN5A-213ENST00000491944 PIH1D3Q9NQM4 214 aaKnown RBP28.28■■■□□ 2.12
SCN5A-213ENST00000491944 RAI14Q9P0K7 980 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 STAP2Q9UGK3 403 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 ADAMTSL1Q8N6G6 1762 aa28.28■■■□□ 2.12
SCN5A-213ENST00000491944 EGFRP00533 1210 aa28.27■■■□□ 2.12
SCN5A-213ENST00000491944 RBM5P52756 815 aaKnown RBP eCLIP28.27■■■□□ 2.12
SCN5A-213ENST00000491944 PI4K2BQ8TCG2 481 aa28.27■■■□□ 2.12
SCN5A-213ENST00000491944 ANTXR1Q9H6X2 564 aa28.27■■■□□ 2.12
SCN5A-213ENST00000491944 PAG1Q9NWQ8 432 aa28.27■■■□□ 2.12
SCN5A-213ENST00000491944 PDE4AP27815 886 aa28.26■■■□□ 2.12
SCN5A-213ENST00000491944 TTF1Q15361 905 aaPredicted RBP28.26■■■□□ 2.12
SCN5A-213ENST00000491944 USP50Q70EL3 339 aaPredicted RBP28.26■■■□□ 2.12
SCN5A-213ENST00000491944 PNMA8AQ86V59 439 aaPredicted RBP28.26■■■□□ 2.12
SCN5A-213ENST00000491944 PLEKHM2Q8IWE5 1019 aa28.26■■■□□ 2.12
SCN5A-213ENST00000491944 EDC3Q96F86 508 aaKnown RBP28.26■■■□□ 2.12
SCN5A-213ENST00000491944 DOCK2Q92608 1830 aa28.26■■■□□ 2.11
SCN5A-213ENST00000491944 MAST2Q6P0Q8 1798 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 KIF3CO14782 793 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 IDH1O75874 414 aaKnown RBP28.25■■■□□ 2.11
SCN5A-213ENST00000491944 DLGAP5Q15398 846 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 TEKT1Q969V4 418 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 SERPINA10Q9UK55 444 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 MYH2Q9UKX2 1941 aa28.25■■■□□ 2.11
SCN5A-213ENST00000491944 CRKP46108 304 aa28.24■■■□□ 2.11
SCN5A-213ENST00000491944 MECOMQ03112 1051 aa28.24■■■□□ 2.11
SCN5A-213ENST00000491944 MAP4K4O95819 1239 aaPredicted RBP28.24■■■□□ 2.11
SCN5A-213ENST00000491944 HDLBPQ00341 1268 aaKnown RBP28.24■■■□□ 2.11
SCN5A-213ENST00000491944 DIXDC1Q155Q3 683 aa28.24■■■□□ 2.11
SCN5A-213ENST00000491944 CLEC11AQ9Y240 323 aa28.24■■■□□ 2.11
SCN5A-213ENST00000491944 PCDHAC2Q9Y5I4 1007 aa28.24■■■□□ 2.11
SCN5A-213ENST00000491944 AOX1Q06278 1338 aa28.23■■■□□ 2.11
SCN5A-213ENST00000491944 HIRAP54198 1017 aaPredicted RBP28.23■■■□□ 2.11
SCN5A-213ENST00000491944 POTEIP0CG38 1075 aa28.22■■■□□ 2.11
SCN5A-213ENST00000491944 POTEJP0CG39 1038 aa28.22■■■□□ 2.11
SCN5A-213ENST00000491944 MAP3K12Q12852 859 aa28.22■■■□□ 2.11
SCN5A-213ENST00000491944 SLF2Q8IX21 1173 aa28.22■■■□□ 2.11
SCN5A-213ENST00000491944 GSTO1P78417 241 aa28.21■■■□□ 2.11
SCN5A-213ENST00000491944 MTMR14Q8NCE2 650 aa28.21■■■□□ 2.11
SCN5A-213ENST00000491944 NSUN4Q96CB9 384 aaKnown RBP28.21■■■□□ 2.11
SCN5A-213ENST00000491944 MRIQ9BWK5 157 aa28.21■■■□□ 2.11
SCN5A-213ENST00000491944 SPDYE2BA6NHP3 402 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 WNT10BO00744 389 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 SPDYE6P0CI01 402 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 NBPF9Q3BBW0 867 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 NAA16Q6N069 864 aaPredicted RBP28.2■■■□□ 2.1
SCN5A-213ENST00000491944 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 OSBPL3Q9H4L5 887 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 MYH7P12883 1935 aa28.2■■■□□ 2.1
SCN5A-213ENST00000491944 ECM29Q5VYK3 1845 aa28.19■■■□□ 2.1
SCN5A-213ENST00000491944 LDHDQ86WU2 507 aa28.19■■■□□ 2.1
SCN5A-213ENST00000491944 ZNF384Q8TF68 577 aa28.19■■■□□ 2.1
SCN5A-213ENST00000491944 ZBED3Q96IU2 234 aaPredicted RBP28.19■■■□□ 2.1
SCN5A-213ENST00000491944 ZDHHC15Q96MV8 337 aa28.19■■■□□ 2.1
SCN5A-213ENST00000491944 DAGLAQ9Y4D2 1042 aa28.19■■■□□ 2.1
SCN5A-213ENST00000491944 MAGEB6Q8N7X4 407 aa28.18■■■□□ 2.1
SCN5A-213ENST00000491944 PRMT6Q96LA8 375 aaPredicted RBP28.18■■■□□ 2.1
SCN5A-213ENST00000491944 ASTN2O75129 1339 aaPredicted RBP28.18■■■□□ 2.1
SCN5A-213ENST00000491944 MYO1BO43795 1136 aa28.17■■■□□ 2.1
SCN5A-213ENST00000491944 LDHCP07864 332 aa28.17■■■□□ 2.1
SCN5A-213ENST00000491944 SKAP1Q86WV1 359 aa28.17■■■□□ 2.1
SCN5A-213ENST00000491944 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.17■■■□□ 2.1
SCN5A-213ENST00000491944 MROH7-TTC4A0A0A0MT08 1334 aa28.17■■■□□ 2.1
SCN5A-213ENST00000491944 IGSF3O75054 1194 aa28.16■■■□□ 2.1
SCN5A-213ENST00000491944 GGA3Q9NZ52 723 aa28.16■■■□□ 2.1
SCN5A-213ENST00000491944 GAKO14976 1311 aa28.16■■■□□ 2.1
SCN5A-213ENST00000491944 CYP7A1P22680 504 aa28.15■■■□□ 2.1
SCN5A-213ENST00000491944 SLC9C2Q5TAH2 1124 aa28.15■■■□□ 2.1
SCN5A-213ENST00000491944 KBTBD3Q8NAB2 608 aa28.15■■■□□ 2.1
SCN5A-213ENST00000491944 ZC3H15Q8WU90 426 aaKnown RBP28.15■■■□□ 2.1
SCN5A-213ENST00000491944 POLR2AP24928 1970 aaKnown RBP28.15■■■□□ 2.1
SCN5A-213ENST00000491944 CLRN2A0PK11 232 aa28.14■■■□□ 2.1
SCN5A-213ENST00000491944 TRIM6-TRIM34B2RNG4 842 aa28.14■■■□□ 2.1
SCN5A-213ENST00000491944 PDE6AP16499 860 aa28.14■■■□□ 2.1
SCN5A-213ENST00000491944 ANGEL2Q5VTE6 544 aaKnown RBP28.14■■■□□ 2.1
SCN5A-213ENST00000491944 APOBEC3HQ6NTF7 200 aaKnown RBP28.14■■■□□ 2.1
SCN5A-213ENST00000491944 FAM163AQ96GL9 167 aaPredicted RBP28.14■■■□□ 2.1
SCN5A-213ENST00000491944 TDRD3Q9H7E2 651 aaKnown RBP28.14■■■□□ 2.1
SCN5A-213ENST00000491944 AK9Q5TCS8 1911 aa28.14■■■□□ 2.09
SCN5A-213ENST00000491944 TOMM70O94826 608 aa28.13■■■□□ 2.09
SCN5A-213ENST00000491944 DCPSQ96C86 337 aaKnown RBP28.13■■■□□ 2.09
SCN5A-213ENST00000491944 NOL10Q9BSC4 688 aaKnown RBP28.13■■■□□ 2.09
SCN5A-213ENST00000491944 FSD1Q9BTV5 496 aa28.13■■■□□ 2.09
SCN5A-213ENST00000491944 BTDP43251 543 aa28.12■■■□□ 2.09
SCN5A-213ENST00000491944 MAP1SQ66K74 1059 aaPredicted RBP28.12■■■□□ 2.09
SCN5A-213ENST00000491944 CHADLQ6NUI6 762 aa28.12■■■□□ 2.09
SCN5A-213ENST00000491944 EVI5LQ96CN4 794 aa28.12■■■□□ 2.09
SCN5A-213ENST00000491944 VEZTQ9HBM0 779 aa28.12■■■□□ 2.09
SCN5A-213ENST00000491944 RGS3P49796 1198 aa28.11■■■□□ 2.09
SCN5A-213ENST00000491944 SPDYE2Q495Y8 402 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms