RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PTPN12Q05209 780 aaKnown RBP10.93□□□□□ -0.66
NUP50-217ENST00000491860 MOB2Q70IA6 237 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 ANKRD13AQ8IZ07 590 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 VGLL2Q8N8G2 317 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 LPIN2Q92539 896 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 ARHGAP45Q92619 1136 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 TEKT1Q969V4 418 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 PRMT6Q96LA8 375 aaPredicted RBP10.93□□□□□ -0.66
NUP50-217ENST00000491860 TMOD2Q9NZR1 351 aa10.93□□□□□ -0.66
NUP50-217ENST00000491860 SCAF8Q9UPN6 1271 aaKnown RBP10.93□□□□□ -0.66
NUP50-217ENST00000491860 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
NUP50-217ENST00000491860 MYH13Q9UKX3 1938 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 CLRN2A0PK11 232 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 GPR25O00155 361 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 CIAO1O76071 339 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 CRKP46108 304 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 PRKG1Q13976 671 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 RASA3Q14644 834 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 LRRC24Q50LG9 513 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 DZIP1LQ8IYY4 767 aaKnown RBP10.92□□□□□ -0.66
NUP50-217ENST00000491860 WDR66Q8TBY9 1149 aa10.92□□□□□ -0.66
NUP50-217ENST00000491860 GNL3LQ9NVN8 582 aaKnown RBP10.92□□□□□ -0.66
NUP50-217ENST00000491860 ZNF70Q9UC06 446 aaPredicted RBP10.92□□□□□ -0.66
NUP50-217ENST00000491860 HTTP42858 3142 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 ZBTB22O15209 634 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 IPO8O15397 1037 aaKnown RBP10.91□□□□□ -0.66
NUP50-217ENST00000491860 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 FGFR2P21802 821 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 FKBP1CQ5VVH2 108 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 HHIPL2Q6UWX4 724 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 JAG2Q9Y219 1238 aa10.91□□□□□ -0.66
NUP50-217ENST00000491860 MKI67P46013 3256 aaKnown RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 SEMA3EO15041 775 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 FKTNO75072 461 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 WDHD1O75717 1129 aaPredicted RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 GNAI3P08754 354 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 HABP4Q5JVS0 413 aaKnown RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 NBPF12Q5TAG4 269 aaPredicted RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 WNK4Q96J92 1243 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 ZDHHC15Q96MV8 337 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 TDRD3Q9H7E2 651 aaKnown RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
NUP50-217ENST00000491860 CSADQ9Y600 493 aa10.9□□□□□ -0.66
NUP50-217ENST00000491860 USP2O75604 605 aaPredicted RBP10.89□□□□□ -0.67
NUP50-217ENST00000491860 RFX5P48382 616 aaPredicted RBP10.89□□□□□ -0.67
NUP50-217ENST00000491860 BCAMP50895 628 aa10.89□□□□□ -0.67
NUP50-217ENST00000491860 INTS3Q68E01 1043 aaKnown RBP10.89□□□□□ -0.67
NUP50-217ENST00000491860 ZGPATQ8N5A5 531 aaKnown RBP10.89□□□□□ -0.67
NUP50-217ENST00000491860 SSC5DA1L4H1 1573 aa10.89□□□□□ -0.67
NUP50-217ENST00000491860 RARSP54136 660 aaKnown RBP10.88□□□□□ -0.67
NUP50-217ENST00000491860 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
NUP50-217ENST00000491860 ARHGEF6Q15052 776 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 ATP2B3Q16720 1220 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 DCAF15Q66K64 600 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 COPRSQ9NQ92 184 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 DENND2AQ9ULE3 1009 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
NUP50-217ENST00000491860 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
NUP50-217ENST00000491860 RPAP1Q9BWH6 1393 aaPredicted RBP10.88□□□□□ -0.67
NUP50-217ENST00000491860 SALL1Q9NSC2 1324 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 TESPA1A2RU30 521 aaPredicted RBP10.87□□□□□ -0.67
NUP50-217ENST00000491860 TCP10L2B9ZVM9 353 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 GTF2A2P52657 109 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 ATG9AQ7Z3C6 839 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 AKAP2Q9Y2D5 859 aa10.87□□□□□ -0.67
NUP50-217ENST00000491860 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
NUP50-217ENST00000491860 LDHBP07195 334 aaKnown RBP10.86□□□□□ -0.67
NUP50-217ENST00000491860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUP50-217ENST00000491860 OPTNQ96CV9 577 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 ERO1AQ96HE7 468 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 CLMNQ96JQ2 1002 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 ZCCHC17Q9NP64 241 aaKnown RBP10.86□□□□□ -0.67
NUP50-217ENST00000491860 LRRFIP2Q9Y608 721 aaKnown RBP10.86□□□□□ -0.67
NUP50-217ENST00000491860 OTOFQ9HC10 1997 aa10.86□□□□□ -0.67
NUP50-217ENST00000491860 CENPFP49454 3210 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 MTX1Q13505 466 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 SPTY2D1Q68D10 685 aaPredicted RBP10.85□□□□□ -0.67
NUP50-217ENST00000491860 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 SIL1Q9H173 461 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 R3HDMLQ9H3Y0 253 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
NUP50-217ENST00000491860 IGF2BP3O00425 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP50-217ENST00000491860 SRGAP3O43295 1099 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 VGLL4Q14135 290 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
NUP50-217ENST00000491860 APOBEC3HQ6NTF7 200 aaKnown RBP10.84□□□□□ -0.67
NUP50-217ENST00000491860 ATF7IPQ6VMQ6 1270 aa10.84□□□□□ -0.67
NUP50-217ENST00000491860 OTOP1Q7RTM1 612 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms