RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TPM4P67936 248 aa11.94□□□□□ -0.5
SREBF2-208ENST00000491541 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
SREBF2-208ENST00000491541 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
SREBF2-208ENST00000491541 FDPSP14324 419 aaKnown RBP11.93□□□□□ -0.5
SREBF2-208ENST00000491541 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
SREBF2-208ENST00000491541 COBLL1Q53SF7 1204 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 ANKZF1Q9H8Y5 726 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 ARHGAP6O43182 974 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 MAGEA9P43362 315 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 EIF1ADQ8N9N8 165 aaKnown RBP11.93□□□□□ -0.5
SREBF2-208ENST00000491541 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 GOLIM4O00461 696 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 SKILP12757 684 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 GUCY2CP25092 1073 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
SREBF2-208ENST00000491541 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
SREBF2-208ENST00000491541 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 CKAP2LQ8IYA6 745 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
SREBF2-208ENST00000491541 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
SREBF2-208ENST00000491541 TRMT1Q9NXH9 659 aaKnown RBP11.92□□□□□ -0.5
SREBF2-208ENST00000491541 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SREBF2-208ENST00000491541 SCRN1Q12765 414 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 ELF2Q15723 593 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 CDKAL1Q5VV42 579 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 ISM2Q6H9L7 571 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 A0A1B0GTH6 734 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 POLR3GO15318 223 aaPredicted RBP11.91□□□□□ -0.5
SREBF2-208ENST00000491541 CIAO1O76071 339 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 IVLP07476 585 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 MED4Q9NPJ6 270 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
SREBF2-208ENST00000491541 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
SREBF2-208ENST00000491541 ACTN2P35609 894 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 TXLNAP40222 546 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 SPATA32Q96LK8 384 aa11.91□□□□□ -0.5
SREBF2-208ENST00000491541 UBTFL1P0CB47 393 aaPredicted RBP11.9□□□□□ -0.5
SREBF2-208ENST00000491541 C3orf20Q8ND61 904 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 DNAAF4Q8WXU2 420 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
SREBF2-208ENST00000491541 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 CASQ1P31415 396 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 NR1I3Q14994 352 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 FERMT3Q86UX7 667 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
SREBF2-208ENST00000491541 SKOR1P84550 965 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 ZMYM1Q5SVZ6 1142 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 MCM10Q7L590 875 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 LTV1Q96GA3 475 aaPredicted RBP11.89□□□□□ -0.51
SREBF2-208ENST00000491541 GOLGA6L19H0YKK7 550 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
SREBF2-208ENST00000491541 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 ENOX1Q8TC92 643 aaKnown RBP11.89□□□□□ -0.51
SREBF2-208ENST00000491541 IP6K1Q92551 441 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
SREBF2-208ENST00000491541 CDK17Q00537 523 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 PLCB4Q15147 1175 aa11.89□□□□□ -0.51
SREBF2-208ENST00000491541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
SREBF2-208ENST00000491541 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 A6NNZ2 444 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 LCA5LO95447 670 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 FBLN1P23142 703 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 TUBB8Q3ZCM7 444 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 ST7Q9NRC1 585 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 DCTN1Q14203 1278 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 FAM71BQ8TC56 605 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 DDX54Q8TDD1 881 aaKnown RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 ZNF396Q96N95 335 aaPredicted RBP11.88□□□□□ -0.51
SREBF2-208ENST00000491541 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
SREBF2-208ENST00000491541 LY75O60449 1722 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
SREBF2-208ENST00000491541 PRLRP16471 622 aa11.87□□□□□ -0.51
SREBF2-208ENST00000491541 MORC3Q14149 939 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms