RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
CDK9-204ENST00000491521 BCAMP50895 628 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
CDK9-204ENST00000491521 FKBP1BP68106 108 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 VGLL2Q8N8G2 317 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 PRMT6Q96LA8 375 aaPredicted RBP16.88■□□□□ 0.29
CDK9-204ENST00000491521 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
CDK9-204ENST00000491521 CA12O43570 354 aa16.87■□□□□ 0.29
CDK9-204ENST00000491521 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
CDK9-204ENST00000491521 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
CDK9-204ENST00000491521 PUM3Q15397 648 aaKnown RBP16.87■□□□□ 0.29
CDK9-204ENST00000491521 FBXO33Q7Z6M2 555 aa16.87■□□□□ 0.29
CDK9-204ENST00000491521 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
CDK9-204ENST00000491521 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
CDK9-204ENST00000491521 GRIK5Q16478 980 aa16.86■□□□□ 0.29
CDK9-204ENST00000491521 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
CDK9-204ENST00000491521 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
CDK9-204ENST00000491521 ANGEL1Q9UNK9 670 aaKnown RBP16.86■□□□□ 0.29
CDK9-204ENST00000491521 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
CDK9-204ENST00000491521 TRPA1O75762 1119 aa16.85■□□□□ 0.29
CDK9-204ENST00000491521 SLC5A1P13866 664 aa16.85■□□□□ 0.29
CDK9-204ENST00000491521 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
CDK9-204ENST00000491521 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
CDK9-204ENST00000491521 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
CDK9-204ENST00000491521 RWDD1Q9H446 243 aaPredicted RBP16.85■□□□□ 0.29
CDK9-204ENST00000491521 MYH13Q9UKX3 1938 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 CRKP46108 304 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 ATP8B2P98198 1209 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 B4GALNT3Q6L9W6 998 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 CEP85Q6P2H3 762 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
CDK9-204ENST00000491521 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
CDK9-204ENST00000491521 HMMRO75330 724 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 COL1A1P02452 1464 aaPredicted RBP16.83■□□□□ 0.28
CDK9-204ENST00000491521 FGFR2P21802 821 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 LPIN2Q92539 896 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 RNF186Q9NXI6 227 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 CEP126Q9P2H0 1117 aa16.83■□□□□ 0.28
CDK9-204ENST00000491521 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.28
CDK9-204ENST00000491521 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
CDK9-204ENST00000491521 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
CDK9-204ENST00000491521 RASA3Q14644 834 aa16.82■□□□□ 0.28
CDK9-204ENST00000491521 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
CDK9-204ENST00000491521 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
CDK9-204ENST00000491521 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
CDK9-204ENST00000491521 CIAO1O76071 339 aa16.81■□□□□ 0.28
CDK9-204ENST00000491521 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
CDK9-204ENST00000491521 PPP2R3BQ9Y5P8 575 aa16.81■□□□□ 0.28
CDK9-204ENST00000491521 PNMA6EA0A0J9YXQ4 647 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
CDK9-204ENST00000491521 IGHDP01880 384 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 IL15P40933 162 aaPredicted RBP16.8■□□□□ 0.28
CDK9-204ENST00000491521 CACNB3P54284 484 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 ABHD8Q96I13 439 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 SAGE1Q9NXZ1 904 aa16.8■□□□□ 0.28
CDK9-204ENST00000491521 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
CDK9-204ENST00000491521 DGKZQ13574 1117 aa16.79■□□□□ 0.28
CDK9-204ENST00000491521 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
CDK9-204ENST00000491521 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
CDK9-204ENST00000491521 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
CDK9-204ENST00000491521 TMEM39BQ9GZU3 492 aa16.79■□□□□ 0.28
CDK9-204ENST00000491521 ADORA1P30542 326 aa16.78■□□□□ 0.28
CDK9-204ENST00000491521 MTX1Q13505 466 aa16.78■□□□□ 0.28
CDK9-204ENST00000491521 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
CDK9-204ENST00000491521 MCOLN1Q9GZU1 580 aa16.78■□□□□ 0.28
CDK9-204ENST00000491521 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
CDK9-204ENST00000491521 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
CDK9-204ENST00000491521 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 TBC1D8O95759 1140 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 PHKA1P46020 1223 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 IREB2P48200 963 aaKnown RBP16.77■□□□□ 0.28
CDK9-204ENST00000491521 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.28
CDK9-204ENST00000491521 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
CDK9-204ENST00000491521 MAST3O60307 1309 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
CDK9-204ENST00000491521 TNNI2P48788 182 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 TFCP2Q12800 502 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 POLA2Q14181 598 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 SPRYD7Q5W111 196 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
CDK9-204ENST00000491521 APBB1O00213 710 aa16.75■□□□□ 0.27
CDK9-204ENST00000491521 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
CDK9-204ENST00000491521 TIMM10P62072 90 aa16.75■□□□□ 0.27
CDK9-204ENST00000491521 HDLBPQ00341 1268 aaKnown RBP16.75■□□□□ 0.27
CDK9-204ENST00000491521 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
CDK9-204ENST00000491521 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
CDK9-204ENST00000491521 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
CDK9-204ENST00000491521 ZDHHC15Q96MV8 337 aa16.75■□□□□ 0.27
CDK9-204ENST00000491521 OTOFQ9HC10 1997 aa16.75■□□□□ 0.27
CDK9-204ENST00000491521 LDHBP07195 334 aaKnown RBP16.74■□□□□ 0.27
CDK9-204ENST00000491521 PRDX5P30044 214 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms