RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
CLCNKA-206ENST00000491433 H7C1W4 665 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 PRMT2P55345 433 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 CHRNDQ07001 517 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 NBPF12Q5TAG4 269 aaPredicted RBP14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 UBE3BQ7Z3V4 1068 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 OPTNQ96CV9 577 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
CLCNKA-206ENST00000491433 CLRN2A0PK11 232 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 GJB1P08034 283 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 IL1R1P14778 569 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 GJA5P36382 358 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 RASA3Q14644 834 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 PTPN18Q99952 460 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 ADAMTS8Q9UP79 889 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
CLCNKA-206ENST00000491433 OTOFQ9HC10 1997 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CCL15-CCL14A0A0B4J2E2 113 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 F8W031 263 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CSF1RP07333 972 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 KLRK1P26718 216 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 TNNI2P48788 182 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 MTFR1Q15390 333 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CCL15Q16663 113 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 TJAP1Q5JTD0 557 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CERS5Q8N5B7 392 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 ELP3Q9H9T3 547 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CSADQ9Y600 493 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 PRUNE2Q8WUY3 3088 aa14.23□□□□□ -0.13
CLCNKA-206ENST00000491433 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-206ENST00000491433 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
CLCNKA-206ENST00000491433 LAMA2P24043 3122 aaKnown RBP14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 MAP3K9P80192 1104 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 GCKRQ14397 625 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 FAM161BQ96MY7 647 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 SERPINA10Q9UK55 444 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 HCN4Q9Y3Q4 1203 aa14.21□□□□□ -0.13
CLCNKA-206ENST00000491433 TLR2O60603 784 aa14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 CETPP11597 493 aa14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 HELBQ8NG08 1087 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 ZNF70Q9UC06 446 aaPredicted RBP14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 CACNA1FO60840 1977 aa14.2□□□□□ -0.14
CLCNKA-206ENST00000491433 HOXD10P28358 340 aa14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 UBE2OQ9C0C9 1292 aaKnown RBP14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 RNF208Q9H0X6 261 aa14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 PCDHAC2Q9Y5I4 1007 aa14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
CLCNKA-206ENST00000491433 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 APAF1O14727 1248 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 TAF5LO75529 589 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 CCL5P13501 91 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 CAPN2P17655 700 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 LACTBP83111 547 aaPredicted RBP14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 VGLL4Q14135 290 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 ZNF697Q5TEC3 545 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 ERO1BQ86YB8 467 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 LINS1Q8NG48 757 aa14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
CLCNKA-206ENST00000491433 CASP7P55210 303 aa14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 SNAPC2Q13487 334 aa14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 MFSD14BQ5SR56 506 aa14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 FAM43AQ8N2R8 423 aa14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 TTF2Q9UNY4 1162 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-206ENST00000491433 SPDYE5A6NIY4 337 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 DNAAF4Q8WXU2 420 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 TEPSINQ96N21 525 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 CDX2Q99626 313 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 TDRD3Q9H7E2 651 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 ZMYND8Q9ULU4 1186 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
CLCNKA-206ENST00000491433 TCP10L2B9ZVM9 353 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 UBXN2AP68543 259 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 HDLBPQ00341 1268 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 FLIIQ13045 1269 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 CCDC57Q2TAC2 916 aa14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-206ENST00000491433 LDHAL6AQ6ZMR3 332 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms