RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.68□□□□□ -0.7
APOBEC3F-204ENST00000491387 GCC1Q96CN9 775 aa10.68□□□□□ -0.7
APOBEC3F-204ENST00000491387 TTF2Q9UNY4 1162 aaKnown RBP10.68□□□□□ -0.7
APOBEC3F-204ENST00000491387 OTOFQ9HC10 1997 aa10.68□□□□□ -0.7
APOBEC3F-204ENST00000491387 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 GYG1P46976 350 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 RBM5P52756 815 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 SP3Q02447 781 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 FKBP1CQ5VVH2 108 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 VGLL2Q8N8G2 317 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 TBC1D22AQ8WUA7 517 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 SUCLG2Q96I99 432 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 ZCCHC17Q9NP64 241 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 JAG2Q9Y219 1238 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 CEP290O15078 2479 aa10.67□□□□□ -0.7
APOBEC3F-204ENST00000491387 ZNF521Q96K83 1311 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 PLIN1O60240 522 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 CRKP46108 304 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 TNNI2P48788 182 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 GTF2A2P52657 109 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 FAM83AQ86UY5 434 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 CD99L2Q8TCZ2 262 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 BRI3BPQ8WY22 251 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 SUGT1Q9Y2Z0 365 aa10.66□□□□□ -0.7
APOBEC3F-204ENST00000491387 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 PDE8BO95263 885 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 CAP1Q01518 475 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 VGLL4Q14135 290 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 ARHGEF6Q15052 776 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 ZDHHC15Q96MV8 337 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 TMEM39BQ9GZU3 492 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 ELP3Q9H9T3 547 aa10.65□□□□□ -0.7
APOBEC3F-204ENST00000491387 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.71
APOBEC3F-204ENST00000491387 MKI67P46013 3256 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZBTB22O15209 634 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 GRIK5Q16478 980 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 TEKT1Q969V4 418 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 HOOK2Q96ED9 719 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZNF333Q96JL9 665 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 BICC1Q9H694 974 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZFYVE28Q9HCC9 887 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 CSADQ9Y600 493 aa10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 MYO5AQ9Y4I1 1855 aaKnown RBP10.64□□□□□ -0.71
APOBEC3F-204ENST00000491387 PTPRCP08575 1304 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CCL15-CCL14A0A0B4J2E2 113 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 TCP10L2B9ZVM9 353 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 GNRH1P01148 92 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 FGFR2P21802 821 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 TAF1CQ15572 869 aaPredicted RBP10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CCL15Q16663 113 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 LRRC24Q50LG9 513 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CAVIN4Q5BKX8 364 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 APOBEC3HQ6NTF7 200 aaKnown RBP10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 HHIPL2Q6UWX4 724 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 FAM43AQ8N2R8 423 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 MRPL50Q8N5N7 158 aaKnown RBP10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CDCA7LQ96GN5 454 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 SNCAIPQ9Y6H5 919 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 CENPFP49454 3210 aa10.63□□□□□ -0.71
APOBEC3F-204ENST00000491387 MAST3O60307 1309 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 TLR2O60603 784 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 CETPP11597 493 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 HABP4Q5JVS0 413 aaKnown RBP10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 METTL24Q5JXM2 366 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 OTUD5Q96G74 571 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 USP44Q9H0E7 712 aa10.62□□□□□ -0.71
APOBEC3F-204ENST00000491387 WDHD1O75717 1129 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 EN2P19622 333 aaPredicted RBP10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 BCAMP50895 628 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 PRMT2P55345 433 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 PPIL2Q13356 520 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 DCAF15Q66K64 600 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 NBPF11Q86T75 865 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZNF112Q9UJU3 913 aa10.61□□□□□ -0.71
APOBEC3F-204ENST00000491387 BTBD19C9JJ37 291 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 IRF6O14896 467 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 IFIT1P09914 478 aaKnown RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 RFX5P48382 616 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 CACNB3P54284 484 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 PPATQ06203 517 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 CHAF1AQ13111 956 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms