RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CSRNP1Q96S65 589 aa20.55■□□□□ 0.88
PDLIM2-217ENST00000491330 PAPPA2Q9BXP8 1791 aa20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 RFX5P48382 616 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 RASA3Q14644 834 aa20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 MOB2Q70IA6 237 aa20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 ZNF70Q9UC06 446 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-217ENST00000491330 THSD7BQ9C0I4 1608 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 SEMA3EO15041 775 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 ALDH1A1P00352 501 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 FGFR2P21802 821 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 SPDYE2Q495Y8 402 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 OTUD7BQ6GQQ9 843 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 MEIS3Q99687 375 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 TDRD3Q9H7E2 651 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
PDLIM2-217ENST00000491330 ANKRD13AQ8IZ07 590 aa20.52■□□□□ 0.88
PDLIM2-217ENST00000491330 ZIC5Q96T25 663 aa20.52■□□□□ 0.88
PDLIM2-217ENST00000491330 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-217ENST00000491330 MANSC4A6NHS7 340 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 TRIM27P14373 513 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 G3BP1Q13283 466 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 LDLRAD1Q5T700 205 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 GORABQ5T7V8 394 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 SLF2Q8IX21 1173 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 ABHD8Q96I13 439 aa20.51■□□□□ 0.87
PDLIM2-217ENST00000491330 TCP10L2B9ZVM9 353 aa20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 BCAR3O75815 825 aa20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 LDHBP07195 334 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 ZBTB48P10074 688 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 HHIPL2Q6UWX4 724 aa20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 ZDHHC15Q96MV8 337 aa20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 POLR2AP24928 1970 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-217ENST00000491330 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 MS4A1P11836 297 aa20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 TM4SF4P48230 202 aa20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 DGKZQ13574 1117 aa20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 MVPQ14764 893 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 SPTY2D1Q68D10 685 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-217ENST00000491330 MKRN3Q13064 507 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 MTX1Q13505 466 aa20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 FKBP1CQ5VVH2 108 aa20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 SPRYD7Q5W111 196 aa20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 CSADQ9Y600 493 aa20.48■□□□□ 0.87
PDLIM2-217ENST00000491330 OS9Q13438 667 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-217ENST00000491330 DCAF15Q66K64 600 aa20.47■□□□□ 0.87
PDLIM2-217ENST00000491330 NEUROD6Q96NK8 337 aa20.47■□□□□ 0.87
PDLIM2-217ENST00000491330 PA2G4Q9UQ80 394 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-217ENST00000491330 CCDC85CA6NKD9 419 aa20.46■□□□□ 0.87
PDLIM2-217ENST00000491330 FAM83AQ86UY5 434 aa20.46■□□□□ 0.87
PDLIM2-217ENST00000491330 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
PDLIM2-217ENST00000491330 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
PDLIM2-217ENST00000491330 USP2O75604 605 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 MAP3K9P80192 1104 aa20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 PKN2Q16513 984 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 CCDC102BQ68D86 513 aa20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
PDLIM2-217ENST00000491330 A0A1B0GUL7 405 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 TIMM10P62072 90 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 TFCP2Q12800 502 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 CTU1Q7Z7A3 348 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 TMEM39BQ9GZU3 492 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 ABCF2Q9UG63 623 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 SALL1Q9NSC2 1324 aa20.43■□□□□ 0.86
PDLIM2-217ENST00000491330 ZBTB22O15209 634 aa20.42■□□□□ 0.86
PDLIM2-217ENST00000491330 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
PDLIM2-217ENST00000491330 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-217ENST00000491330 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-217ENST00000491330 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
PDLIM2-217ENST00000491330 PHKA1P46020 1223 aa20.41■□□□□ 0.86
PDLIM2-217ENST00000491330 APOBEC3HQ6NTF7 200 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-217ENST00000491330 XAGE2Q96GT9 111 aa20.41■□□□□ 0.86
PDLIM2-217ENST00000491330 LDHCP07864 332 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 GSTO1P78417 241 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 GRIK5Q16478 980 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 PDS5AQ29RF7 1337 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 FAM151AQ8WW52 585 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 CLMNQ96JQ2 1002 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 FZD1Q9UP38 647 aa20.4■□□□□ 0.86
PDLIM2-217ENST00000491330 PCNTO95613 3336 aa20.39■□□□□ 0.86
PDLIM2-217ENST00000491330 GPR25O00155 361 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 FKTNO75072 461 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 GTF2A2P52657 109 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 CACNB3P54284 484 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 ARHGEF6Q15052 776 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 CCDC158Q5M9N0 1113 aa20.39■□□□□ 0.85
PDLIM2-217ENST00000491330 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms