RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
PHC3-213ENST00000491258 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
PHC3-213ENST00000491258 CYP26A1O43174 497 aa8.53□□□□□ -1.04
PHC3-213ENST00000491258 ADMP35318 185 aa8.53□□□□□ -1.04
PHC3-213ENST00000491258 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
PHC3-213ENST00000491258 PRKAG2Q9UGJ0 569 aa8.53□□□□□ -1.04
PHC3-213ENST00000491258 A0A096LPE4 126 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 ADH5P11766 374 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 FKBP4Q02790 459 aaKnown RBP eCLIP8.52□□□□□ -1.05
PHC3-213ENST00000491258 ZNF211Q13398 564 aaPredicted RBP8.52□□□□□ -1.05
PHC3-213ENST00000491258 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
PHC3-213ENST00000491258 ZAR1Q86SH2 424 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 TP53INP2Q8IXH6 220 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 GJD3Q8N144 294 aa8.52□□□□□ -1.05
PHC3-213ENST00000491258 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
PHC3-213ENST00000491258 RAB6AP20340 208 aa8.51□□□□□ -1.05
PHC3-213ENST00000491258 MAOBP27338 520 aa8.51□□□□□ -1.05
PHC3-213ENST00000491258 VSIG10LQ86VR7 867 aa8.51□□□□□ -1.05
PHC3-213ENST00000491258 KRTAP4-9Q9BYQ8 210 aa8.51□□□□□ -1.05
PHC3-213ENST00000491258 NRSN2Q9GZP1 204 aa8.51□□□□□ -1.05
PHC3-213ENST00000491258 CLEC4MQ9H2X3 399 aaPredicted RBP8.51□□□□□ -1.05
PHC3-213ENST00000491258 FAM170BA6NMN3 283 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 FZD5Q13467 585 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 POU4F3Q15319 338 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 SPRED3Q2MJR0 410 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 EZH1Q92800 747 aaPredicted RBP8.5□□□□□ -1.05
PHC3-213ENST00000491258 FBXL18Q96ME1 805 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 LIN7BQ9HAP6 207 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 ACTL7BQ9Y614 415 aa8.5□□□□□ -1.05
PHC3-213ENST00000491258 A0A1W2PP55 124 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 PRNPP04156 253 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 CTSBP07858 339 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 NFICP08651 508 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 AKAP4Q5JQC9 854 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 DYMQ7RTS9 669 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
PHC3-213ENST00000491258 BSDC1Q9NW68 430 aaPredicted RBP8.49□□□□□ -1.05
PHC3-213ENST00000491258 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 CYP11A1P05108 521 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 GRIA4P48058 902 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 MAP7Q14244 749 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
PHC3-213ENST00000491258 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 LRRC4CQ9HCJ2 640 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
PHC3-213ENST00000491258 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
PHC3-213ENST00000491258 PHLDB3Q6NSJ2 640 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 NFXL1Q6ZNB6 911 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 GALNT12Q8IXK2 581 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 FLCNQ8NFG4 579 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 GATA6Q92908 595 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 TCF12Q99081 682 aa8.47□□□□□ -1.05
PHC3-213ENST00000491258 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.05
PHC3-213ENST00000491258 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
PHC3-213ENST00000491258 ZFYVE1Q9HBF4 777 aa8.46□□□□□ -1.06
PHC3-213ENST00000491258 ZNF765Q7L2R6 523 aa8.45□□□□□ -1.06
PHC3-213ENST00000491258 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
PHC3-213ENST00000491258 SEMA6CQ9H3T2 930 aa8.45□□□□□ -1.06
PHC3-213ENST00000491258 FAM105AQ9NUU6 356 aa8.45□□□□□ -1.06
PHC3-213ENST00000491258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.44□□□□□ -1.06
PHC3-213ENST00000491258 ECEL1O95672 775 aa8.44□□□□□ -1.06
PHC3-213ENST00000491258 ASPAP45381 313 aa8.44□□□□□ -1.06
PHC3-213ENST00000491258 CYP27A1Q02318 531 aa8.44□□□□□ -1.06
PHC3-213ENST00000491258 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
PHC3-213ENST00000491258 CBLL1Q75N03 491 aa8.44□□□□□ -1.06
PHC3-213ENST00000491258 TRIM56Q9BRZ2 755 aaKnown RBP8.44□□□□□ -1.06
PHC3-213ENST00000491258 ZC3H7BQ9UGR2 993 aaKnown RBP8.44□□□□□ -1.06
PHC3-213ENST00000491258 PDE3AQ14432 1141 aa8.43□□□□□ -1.06
PHC3-213ENST00000491258 ACSS3Q9H6R3 686 aa8.43□□□□□ -1.06
PHC3-213ENST00000491258 LGR6Q9HBX8 967 aa8.43□□□□□ -1.06
PHC3-213ENST00000491258 BRPF3Q9ULD4 1205 aa8.43□□□□□ -1.06
PHC3-213ENST00000491258 DAGLAQ9Y4D2 1042 aa8.43□□□□□ -1.06
PHC3-213ENST00000491258 OGFOD2Q6N063 350 aa8.42□□□□□ -1.06
PHC3-213ENST00000491258 AGBL5Q8NDL9 886 aa8.42□□□□□ -1.06
PHC3-213ENST00000491258 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
PHC3-213ENST00000491258 EHD4Q9H223 541 aa8.42□□□□□ -1.06
PHC3-213ENST00000491258 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
PHC3-213ENST00000491258 B3GALT4O96024 378 aa8.41□□□□□ -1.06
PHC3-213ENST00000491258 NEFLP07196 543 aa8.41□□□□□ -1.06
PHC3-213ENST00000491258 COL19A1Q14993 1142 aa8.41□□□□□ -1.06
PHC3-213ENST00000491258 PAK6Q9NQU5 681 aaPredicted RBP8.41□□□□□ -1.06
PHC3-213ENST00000491258 H3BRB1 525 aa8.4□□□□□ -1.06
PHC3-213ENST00000491258 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
PHC3-213ENST00000491258 GLYCTKQ8IVS8 523 aa8.4□□□□□ -1.06
PHC3-213ENST00000491258 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.06
PHC3-213ENST00000491258 DYNC1LI2O43237 492 aaPredicted RBP8.39□□□□□ -1.07
PHC3-213ENST00000491258 ICMTO60725 284 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 AOC2O75106 756 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 JUNBP17275 347 aaPredicted RBP8.39□□□□□ -1.07
PHC3-213ENST00000491258 WDR18Q9BV38 432 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
PHC3-213ENST00000491258 ITGB5P18084 799 aa8.38□□□□□ -1.07
PHC3-213ENST00000491258 ITPKAP23677 461 aa8.38□□□□□ -1.07
PHC3-213ENST00000491258 ORC1Q13415 861 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms