RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 COPRSQ9NQ92 184 aa22.45■■□□□ 1.18
HMGN1-219ENST00000491183 ANGEL1Q9UNK9 670 aaKnown RBP22.45■■□□□ 1.18
HMGN1-219ENST00000491183 SSC5DA1L4H1 1573 aa22.45■■□□□ 1.18
HMGN1-219ENST00000491183 TRPA1O75762 1119 aa22.44■■□□□ 1.18
HMGN1-219ENST00000491183 GNAI3P08754 354 aa22.44■■□□□ 1.18
HMGN1-219ENST00000491183 RASA3Q14644 834 aa22.44■■□□□ 1.18
HMGN1-219ENST00000491183 SAGE1Q9NXZ1 904 aa22.44■■□□□ 1.18
HMGN1-219ENST00000491183 CEP126Q9P2H0 1117 aa22.44■■□□□ 1.18
HMGN1-219ENST00000491183 IL15P40933 162 aaPredicted RBP22.43■■□□□ 1.18
HMGN1-219ENST00000491183 HDLBPQ00341 1268 aaKnown RBP22.43■■□□□ 1.18
HMGN1-219ENST00000491183 MAP3K11Q16584 847 aa22.43■■□□□ 1.18
HMGN1-219ENST00000491183 REM2Q8IYK8 340 aaPredicted RBP22.43■■□□□ 1.18
HMGN1-219ENST00000491183 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
HMGN1-219ENST00000491183 ATP2B3Q16720 1220 aa22.42■■□□□ 1.18
HMGN1-219ENST00000491183 MKRN3Q13064 507 aaKnown RBP22.41■■□□□ 1.18
HMGN1-219ENST00000491183 MTX1Q13505 466 aa22.41■■□□□ 1.18
HMGN1-219ENST00000491183 SUPT20HL1Q3ZLR7 823 aa22.41■■□□□ 1.18
HMGN1-219ENST00000491183 ABHD8Q96I13 439 aa22.41■■□□□ 1.18
HMGN1-219ENST00000491183 MRIQ9BWK5 157 aa22.41■■□□□ 1.18
HMGN1-219ENST00000491183 MYH13Q9UKX3 1938 aa22.4■■□□□ 1.18
HMGN1-219ENST00000491183 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
HMGN1-219ENST00000491183 PPP1R12BO60237 982 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-219ENST00000491183 USP2O75604 605 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-219ENST00000491183 TM4SF4P48230 202 aa22.4■■□□□ 1.18
HMGN1-219ENST00000491183 SUGT1Q9Y2Z0 365 aa22.4■■□□□ 1.18
HMGN1-219ENST00000491183 TCP10L2B9ZVM9 353 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 CDAN1Q8IWY9 1227 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 TEKT1Q969V4 418 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 CLMNQ96JQ2 1002 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 TEPSINQ96N21 525 aa22.39■■□□□ 1.17
HMGN1-219ENST00000491183 TNFAIP1Q13829 316 aa22.38■■□□□ 1.17
HMGN1-219ENST00000491183 SPRYD7Q5W111 196 aa22.38■■□□□ 1.17
HMGN1-219ENST00000491183 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
HMGN1-219ENST00000491183 WDR66Q8TBY9 1149 aa22.38■■□□□ 1.17
HMGN1-219ENST00000491183 ZDHHC15Q96MV8 337 aa22.38■■□□□ 1.17
HMGN1-219ENST00000491183 GNAI2P04899 355 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 ADORA1P30542 326 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 PHKA1P46020 1223 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 TIMM10P62072 90 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 APOBEC3HQ6NTF7 200 aaKnown RBP22.37■■□□□ 1.17
HMGN1-219ENST00000491183 SLC10A4Q96EP9 437 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 TMEM39BQ9GZU3 492 aa22.37■■□□□ 1.17
HMGN1-219ENST00000491183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-219ENST00000491183 CACNB3P54284 484 aa22.36■■□□□ 1.17
HMGN1-219ENST00000491183 HHIPL2Q6UWX4 724 aa22.36■■□□□ 1.17
HMGN1-219ENST00000491183 MCOLN1Q9GZU1 580 aa22.36■■□□□ 1.17
HMGN1-219ENST00000491183 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-219ENST00000491183 MAST3O60307 1309 aa22.35■■□□□ 1.17
HMGN1-219ENST00000491183 PNMA6EA0A0J9YXQ4 647 aa22.35■■□□□ 1.17
HMGN1-219ENST00000491183 TFCP2Q12800 502 aa22.35■■□□□ 1.17
HMGN1-219ENST00000491183 GNL3LQ9NVN8 582 aaKnown RBP22.35■■□□□ 1.17
HMGN1-219ENST00000491183 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 UNCXA6NJT0 531 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 IREB2P48200 963 aaKnown RBP22.34■■□□□ 1.17
HMGN1-219ENST00000491183 TNNI2P48788 182 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 DGKZQ13574 1117 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 CCDC102BQ68D86 513 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 WNK4Q96J92 1243 aa22.34■■□□□ 1.17
HMGN1-219ENST00000491183 ZBTB22O15209 634 aa22.33■■□□□ 1.17
HMGN1-219ENST00000491183 TBC1D8O95759 1140 aa22.33■■□□□ 1.17
HMGN1-219ENST00000491183 PRDX5P30044 214 aa22.33■■□□□ 1.17
HMGN1-219ENST00000491183 DENND2AQ9ULE3 1009 aa22.33■■□□□ 1.17
HMGN1-219ENST00000491183 A0A1B0GUL7 405 aa22.32■■□□□ 1.16
HMGN1-219ENST00000491183 SEMA3EO15041 775 aa22.32■■□□□ 1.16
HMGN1-219ENST00000491183 SREBF2Q12772 1141 aa22.32■■□□□ 1.16
HMGN1-219ENST00000491183 ANKRD13AQ8IZ07 590 aa22.32■■□□□ 1.16
HMGN1-219ENST00000491183 OTOFQ9HC10 1997 aa22.32■■□□□ 1.16
HMGN1-219ENST00000491183 SALL1Q9NSC2 1324 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 ZBTB48P10074 688 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-219ENST00000491183 RLBP1P12271 317 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 GJA5P36382 358 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 DIXDC1Q155Q3 683 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 FKBP1CQ5VVH2 108 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 XAGE2Q96GT9 111 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
HMGN1-219ENST00000491183 MANSC4A6NHS7 340 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-219ENST00000491183 LDHBP07195 334 aaKnown RBP22.3■■□□□ 1.16
HMGN1-219ENST00000491183 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.3■■□□□ 1.16
HMGN1-219ENST00000491183 FAM83AQ86UY5 434 aa22.3■■□□□ 1.16
HMGN1-219ENST00000491183 R3HDMLQ9H3Y0 253 aa22.3■■□□□ 1.16
HMGN1-219ENST00000491183 TMOD2Q9NZR1 351 aa22.3■■□□□ 1.16
HMGN1-219ENST00000491183 DAGLAQ9Y4D2 1042 aa22.3■■□□□ 1.16
HMGN1-219ENST00000491183 LAMB1P07942 1786 aa22.3■■□□□ 1.16
HMGN1-219ENST00000491183 INHBEP58166 350 aa22.29■■□□□ 1.16
HMGN1-219ENST00000491183 RASGRF1Q13972 1273 aa22.29■■□□□ 1.16
HMGN1-219ENST00000491183 CCDC85CA6NKD9 419 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 ZBTB7BO15156 539 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-219ENST00000491183 POLA2Q14181 598 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 CDC42EP5Q6NZY7 148 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.28■■□□□ 1.16
HMGN1-219ENST00000491183 NEUROD6Q96NK8 337 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 CFHR5Q9BXR6 569 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 ELP3Q9H9T3 547 aa22.28■■□□□ 1.16
HMGN1-219ENST00000491183 GPR25O00155 361 aa22.27■■□□□ 1.16
HMGN1-219ENST00000491183 MAP3K9P80192 1104 aa22.27■■□□□ 1.16
HMGN1-219ENST00000491183 ATP8B2P98198 1209 aa22.27■■□□□ 1.16
HMGN1-219ENST00000491183 G3BP1Q13283 466 aaKnown RBP eCLIP22.27■■□□□ 1.16
HMGN1-219ENST00000491183 IFNL1Q8IU54 200 aa22.27■■□□□ 1.16
HMGN1-219ENST00000491183 ZNF296Q8WUU4 475 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms