RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 PPP2R3BQ9Y5P8 575 aa25.9■■□□□ 1.74
RGPD6-211ENST00000490990 A0A1B0GUL7 405 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 ZNF157P51786 506 aaPredicted RBP25.89■■□□□ 1.74
RGPD6-211ENST00000490990 NOGQ13253 232 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 SPDYE2Q495Y8 402 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 COL13A1Q5TAT6 717 aaPredicted RBP25.89■■□□□ 1.74
RGPD6-211ENST00000490990 MOB2Q70IA6 237 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 CCDC102AQ96A19 550 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 MRIQ9BWK5 157 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 VEZTQ9HBM0 779 aa25.89■■□□□ 1.74
RGPD6-211ENST00000490990 SEMA3EO15041 775 aa25.88■■□□□ 1.73
RGPD6-211ENST00000490990 MS4A1P11836 297 aa25.88■■□□□ 1.73
RGPD6-211ENST00000490990 G3BP1Q13283 466 aaKnown RBP eCLIP25.88■■□□□ 1.73
RGPD6-211ENST00000490990 CCDC102BQ68D86 513 aa25.88■■□□□ 1.73
RGPD6-211ENST00000490990 ZNF70Q9UC06 446 aaPredicted RBP25.88■■□□□ 1.73
RGPD6-211ENST00000490990 MAST3O60307 1309 aa25.88■■□□□ 1.73
RGPD6-211ENST00000490990 TEKT1Q969V4 418 aa25.87■■□□□ 1.73
RGPD6-211ENST00000490990 XAGE2Q96GT9 111 aa25.87■■□□□ 1.73
RGPD6-211ENST00000490990 ZIC5Q96T25 663 aa25.87■■□□□ 1.73
RGPD6-211ENST00000490990 TDRD3Q9H7E2 651 aaKnown RBP25.87■■□□□ 1.73
RGPD6-211ENST00000490990 DENND2AQ9ULE3 1009 aa25.87■■□□□ 1.73
RGPD6-211ENST00000490990 SLC10A3P09131 477 aa25.86■■□□□ 1.73
RGPD6-211ENST00000490990 CTCFP49711 727 aaPredicted RBP25.86■■□□□ 1.73
RGPD6-211ENST00000490990 SSC5DA1L4H1 1573 aa25.86■■□□□ 1.73
RGPD6-211ENST00000490990 SALL1Q9NSC2 1324 aa25.86■■□□□ 1.73
RGPD6-211ENST00000490990 UBE2Q2LH0YL09 131 aa25.85■■□□□ 1.73
RGPD6-211ENST00000490990 TTLL12Q14166 644 aaPredicted RBP25.85■■□□□ 1.73
RGPD6-211ENST00000490990 ZDHHC15Q96MV8 337 aa25.85■■□□□ 1.73
RGPD6-211ENST00000490990 TNFAIP1Q13829 316 aa25.84■■□□□ 1.73
RGPD6-211ENST00000490990 RASA3Q14644 834 aa25.84■■□□□ 1.73
RGPD6-211ENST00000490990 RASAL3Q86YV0 1011 aa25.84■■□□□ 1.73
RGPD6-211ENST00000490990 BEGAINQ9BUH8 593 aa25.84■■□□□ 1.73
RGPD6-211ENST00000490990 RASGRF1Q13972 1273 aa25.83■■□□□ 1.73
RGPD6-211ENST00000490990 MVPQ14764 893 aaKnown RBP25.83■■□□□ 1.73
RGPD6-211ENST00000490990 CEP85Q6P2H3 762 aa25.83■■□□□ 1.73
RGPD6-211ENST00000490990 HHIPL2Q6UWX4 724 aa25.83■■□□□ 1.73
RGPD6-211ENST00000490990 NOP58Q9Y2X3 529 aaKnown RBP25.83■■□□□ 1.73
RGPD6-211ENST00000490990 PDS5AQ29RF7 1337 aaKnown RBP25.83■■□□□ 1.73
RGPD6-211ENST00000490990 HSPA8P11142 646 aaKnown RBP25.82■■□□□ 1.72
RGPD6-211ENST00000490990 PRDX5P30044 214 aa25.82■■□□□ 1.72
RGPD6-211ENST00000490990 APOBEC3HQ6NTF7 200 aaKnown RBP25.82■■□□□ 1.72
RGPD6-211ENST00000490990 ARMC9Q7Z3E5 817 aa25.82■■□□□ 1.72
RGPD6-211ENST00000490990 NEUROD6Q96NK8 337 aa25.82■■□□□ 1.72
RGPD6-211ENST00000490990 PRDM10Q9NQV6 1147 aa25.82■■□□□ 1.72
RGPD6-211ENST00000490990 SURF6O75683 361 aaKnown RBP25.81■■□□□ 1.72
RGPD6-211ENST00000490990 LBX1P52954 281 aa25.81■■□□□ 1.72
RGPD6-211ENST00000490990 PRKG1Q13976 671 aa25.81■■□□□ 1.72
RGPD6-211ENST00000490990 LDHBP07195 334 aaKnown RBP25.8■■□□□ 1.72
RGPD6-211ENST00000490990 KIF23Q02241 960 aaPredicted RBP25.8■■□□□ 1.72
RGPD6-211ENST00000490990 MAP3K11Q16584 847 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 SUPT20HL1Q3ZLR7 823 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 LDLRAD1Q5T700 205 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 NBPF12Q5TAG4 269 aaPredicted RBP25.8■■□□□ 1.72
RGPD6-211ENST00000490990 GPR108Q9NPR9 543 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 ANGEL1Q9UNK9 670 aaKnown RBP25.8■■□□□ 1.72
RGPD6-211ENST00000490990 FZD1Q9UP38 647 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 COG6Q9Y2V7 657 aa25.8■■□□□ 1.72
RGPD6-211ENST00000490990 TCP10L2B9ZVM9 353 aa25.79■■□□□ 1.72
RGPD6-211ENST00000490990 OS9Q13438 667 aaPredicted RBP25.79■■□□□ 1.72
RGPD6-211ENST00000490990 ZGPATQ8N5A5 531 aaKnown RBP25.79■■□□□ 1.72
RGPD6-211ENST00000490990 DDX19BQ9UMR2 479 aa25.79■■□□□ 1.72
RGPD6-211ENST00000490990 CA12O43570 354 aa25.78■■□□□ 1.72
RGPD6-211ENST00000490990 PPP1R12BO60237 982 aaPredicted RBP25.78■■□□□ 1.72
RGPD6-211ENST00000490990 TNNI2P48788 182 aa25.78■■□□□ 1.72
RGPD6-211ENST00000490990 DIXDC1Q155Q3 683 aa25.78■■□□□ 1.72
RGPD6-211ENST00000490990 TEPSINQ96N21 525 aa25.78■■□□□ 1.72
RGPD6-211ENST00000490990 DAGLAQ9Y4D2 1042 aa25.78■■□□□ 1.72
RGPD6-211ENST00000490990 AKAP11Q9UKA4 1901 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 MYH2Q9UKX2 1941 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 CACNB3P54284 484 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 TNNI3KQ59H18 835 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 GORABQ5T7V8 394 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 FPGT-TNNI3KV9GXZ4 949 aa25.77■■□□□ 1.72
RGPD6-211ENST00000490990 ARID4AP29374 1257 aaPredicted RBP25.76■■□□□ 1.71
RGPD6-211ENST00000490990 FKBP1CQ5VVH2 108 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 CDAN1Q8IWY9 1227 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 CSRNP1Q96S65 589 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 TMEM39BQ9GZU3 492 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 ZBTB40Q9NUA8 1239 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 TMOD2Q9NZR1 351 aa25.76■■□□□ 1.71
RGPD6-211ENST00000490990 IFFO2Q5TF58 517 aa25.75■■□□□ 1.71
RGPD6-211ENST00000490990 HMG20BQ9P0W2 317 aa25.75■■□□□ 1.71
RGPD6-211ENST00000490990 TSKSQ9UJT2 592 aa25.75■■□□□ 1.71
RGPD6-211ENST00000490990 USP2O75604 605 aaPredicted RBP25.74■■□□□ 1.71
RGPD6-211ENST00000490990 PDE3AQ14432 1141 aa25.74■■□□□ 1.71
RGPD6-211ENST00000490990 FAM83AQ86UY5 434 aa25.74■■□□□ 1.71
RGPD6-211ENST00000490990 REM2Q8IYK8 340 aaPredicted RBP25.74■■□□□ 1.71
RGPD6-211ENST00000490990 SPATA5Q8NB90 893 aa25.74■■□□□ 1.71
RGPD6-211ENST00000490990 ABCF2Q9UG63 623 aa25.74■■□□□ 1.71
RGPD6-211ENST00000490990 OTOFQ9HC10 1997 aa25.74■■□□□ 1.71
RGPD6-211ENST00000490990 UNCXA6NJT0 531 aa25.73■■□□□ 1.71
RGPD6-211ENST00000490990 C20orf194Q5TEA3 1177 aa25.73■■□□□ 1.71
RGPD6-211ENST00000490990 PI16Q6UXB8 463 aa25.73■■□□□ 1.71
RGPD6-211ENST00000490990 TNS4Q8IZW8 715 aa25.73■■□□□ 1.71
RGPD6-211ENST00000490990 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.73■■□□□ 1.71
RGPD6-211ENST00000490990 DBNDD2Q9BQY9 259 aa25.73■■□□□ 1.71
RGPD6-211ENST00000490990 UQCRFS1P1P0C7P4 283 aa25.72■■□□□ 1.71
RGPD6-211ENST00000490990 MCAMP43121 646 aa25.72■■□□□ 1.71
RGPD6-211ENST00000490990 IREB2P48200 963 aaKnown RBP25.72■■□□□ 1.71
RGPD6-211ENST00000490990 SPTY2D1Q68D10 685 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms