RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ARMC9Q7Z3E5 817 aa38.99■■■■□ 3.83
LDB1-204ENST00000490751 DZIP1LQ8IYY4 767 aaKnown RBP38.99■■■■□ 3.83
LDB1-204ENST00000490751 SPDYE2Q495Y8 402 aa38.98■■■■□ 3.83
LDB1-204ENST00000490751 TDRD3Q9H7E2 651 aaKnown RBP38.98■■■■□ 3.83
LDB1-204ENST00000490751 ZNF70Q9UC06 446 aaPredicted RBP38.98■■■■□ 3.83
LDB1-204ENST00000490751 SSC5DA1L4H1 1573 aa38.98■■■■□ 3.83
LDB1-204ENST00000490751 AKAP11Q9UKA4 1901 aa38.97■■■■□ 3.83
LDB1-204ENST00000490751 HDLBPQ00341 1268 aaKnown RBP38.96■■■■□ 3.83
LDB1-204ENST00000490751 ANGEL1Q9UNK9 670 aaKnown RBP38.96■■■■□ 3.83
LDB1-204ENST00000490751 RASA3Q14644 834 aa38.95■■■■□ 3.83
LDB1-204ENST00000490751 FZD1Q9UP38 647 aa38.95■■■■□ 3.83
LDB1-204ENST00000490751 WDR66Q8TBY9 1149 aa38.94■■■■□ 3.82
LDB1-204ENST00000490751 TEKT1Q969V4 418 aa38.94■■■■□ 3.82
LDB1-204ENST00000490751 CSRNP1Q96S65 589 aa38.94■■■■□ 3.82
LDB1-204ENST00000490751 SUGT1Q9Y2Z0 365 aa38.94■■■■□ 3.82
LDB1-204ENST00000490751 TNFAIP1Q13829 316 aa38.93■■■■□ 3.82
LDB1-204ENST00000490751 FTSJ3Q8IY81 847 aaKnown RBP38.93■■■■□ 3.82
LDB1-204ENST00000490751 MAST3O60307 1309 aa38.92■■■■□ 3.82
LDB1-204ENST00000490751 CAPN15O75808 1086 aa38.92■■■■□ 3.82
LDB1-204ENST00000490751 SUPT20HL1Q3ZLR7 823 aa38.92■■■■□ 3.82
LDB1-204ENST00000490751 NBPF12Q5TAG4 269 aaPredicted RBP38.92■■■■□ 3.82
LDB1-204ENST00000490751 GNL3LQ9NVN8 582 aaKnown RBP38.92■■■■□ 3.82
LDB1-204ENST00000490751 ADORA1P30542 326 aa38.91■■■■□ 3.82
LDB1-204ENST00000490751 LDLRAD1Q5T700 205 aa38.91■■■■□ 3.82
LDB1-204ENST00000490751 PNMA6EA0A0J9YXQ4 647 aa38.9■■■■□ 3.82
LDB1-204ENST00000490751 PHKA1P46020 1223 aa38.9■■■■□ 3.82
LDB1-204ENST00000490751 REM2Q8IYK8 340 aaPredicted RBP38.9■■■■□ 3.82
LDB1-204ENST00000490751 PPP1R12BO60237 982 aaPredicted RBP38.89■■■■□ 3.82
LDB1-204ENST00000490751 TFCP2Q12800 502 aa38.89■■■■□ 3.82
LDB1-204ENST00000490751 MRIQ9BWK5 157 aa38.89■■■■□ 3.82
LDB1-204ENST00000490751 SAGE1Q9NXZ1 904 aa38.89■■■■□ 3.82
LDB1-204ENST00000490751 CASP8AP2Q9UKL3 1982 aa38.88■■■■□ 3.82
LDB1-204ENST00000490751 TCP10L2B9ZVM9 353 aa38.88■■■■□ 3.81
LDB1-204ENST00000490751 MAP3K11Q16584 847 aa38.88■■■■□ 3.81
LDB1-204ENST00000490751 ZDHHC15Q96MV8 337 aa38.88■■■■□ 3.81
LDB1-204ENST00000490751 RNF186Q9NXI6 227 aa38.88■■■■□ 3.81
LDB1-204ENST00000490751 RLBP1P12271 317 aa38.87■■■■□ 3.81
LDB1-204ENST00000490751 TIMM10P62072 90 aa38.87■■■■□ 3.81
LDB1-204ENST00000490751 TRPA1O75762 1119 aa38.86■■■■□ 3.81
LDB1-204ENST00000490751 MKRN3Q13064 507 aaKnown RBP38.86■■■■□ 3.81
LDB1-204ENST00000490751 CCDC102BQ68D86 513 aa38.86■■■■□ 3.81
LDB1-204ENST00000490751 ITPRIPQ8IWB1 547 aa38.86■■■■□ 3.81
LDB1-204ENST00000490751 DENND2AQ9ULE3 1009 aa38.86■■■■□ 3.81
LDB1-204ENST00000490751 AKAP2Q9Y2D5 859 aa38.86■■■■□ 3.81
LDB1-204ENST00000490751 A0A1B0GUL7 405 aa38.85■■■■□ 3.81
LDB1-204ENST00000490751 SEMA3EO15041 775 aa38.85■■■■□ 3.81
LDB1-204ENST00000490751 TNNI2P48788 182 aa38.85■■■■□ 3.81
LDB1-204ENST00000490751 HHIPL2Q6UWX4 724 aa38.84■■■■□ 3.81
LDB1-204ENST00000490751 CACNB3P54284 484 aa38.83■■■■□ 3.81
LDB1-204ENST00000490751 APOBEC3HQ6NTF7 200 aaKnown RBP38.83■■■■□ 3.81
LDB1-204ENST00000490751 TMEM39BQ9GZU3 492 aa38.83■■■■□ 3.81
LDB1-204ENST00000490751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP38.83■■■■□ 3.81
LDB1-204ENST00000490751 PRDX5P30044 214 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 CDAN1Q8IWY9 1227 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 XAGE2Q96GT9 111 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 TEPSINQ96N21 525 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 C1orf115Q9H7X2 142 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 TMOD2Q9NZR1 351 aa38.82■■■■□ 3.8
LDB1-204ENST00000490751 ZBTB4Q9P1Z0 1013 aaPredicted RBP38.82■■■■□ 3.8
LDB1-204ENST00000490751 ZBTB22O15209 634 aa38.81■■■■□ 3.8
LDB1-204ENST00000490751 IREB2P48200 963 aaKnown RBP38.81■■■■□ 3.8
LDB1-204ENST00000490751 G3BP1Q13283 466 aaKnown RBP eCLIP38.81■■■■□ 3.8
LDB1-204ENST00000490751 CLMNQ96JQ2 1002 aa38.81■■■■□ 3.8
LDB1-204ENST00000490751 SALL1Q9NSC2 1324 aa38.81■■■■□ 3.8
LDB1-204ENST00000490751 OTOFQ9HC10 1997 aa38.81■■■■□ 3.8
LDB1-204ENST00000490751 USP2O75604 605 aaPredicted RBP38.8■■■■□ 3.8
LDB1-204ENST00000490751 SPRYD7Q5W111 196 aa38.8■■■■□ 3.8
LDB1-204ENST00000490751 SLC10A4Q96EP9 437 aa38.8■■■■□ 3.8
LDB1-204ENST00000490751 LDHBP07195 334 aaKnown RBP38.79■■■■□ 3.8
LDB1-204ENST00000490751 ZBTB7BO15156 539 aaPredicted RBP38.78■■■■□ 3.8
LDB1-204ENST00000490751 RASGRF1Q13972 1273 aa38.78■■■■□ 3.8
LDB1-204ENST00000490751 POLA2Q14181 598 aa38.78■■■■□ 3.8
LDB1-204ENST00000490751 MVPQ14764 893 aaKnown RBP38.78■■■■□ 3.8
LDB1-204ENST00000490751 DIXDC1Q155Q3 683 aa38.78■■■■□ 3.8
LDB1-204ENST00000490751 NEUROD6Q96NK8 337 aa38.78■■■■□ 3.8
LDB1-204ENST00000490751 UNCXA6NJT0 531 aa38.77■■■■□ 3.8
LDB1-204ENST00000490751 DAGLAQ9Y4D2 1042 aa38.77■■■■□ 3.8
LDB1-204ENST00000490751 TM4SF4P48230 202 aa38.76■■■■□ 3.8
LDB1-204ENST00000490751 ATP8B2P98198 1209 aa38.76■■■■□ 3.8
LDB1-204ENST00000490751 PDS5AQ29RF7 1337 aaKnown RBP38.75■■■■□ 3.79
LDB1-204ENST00000490751 SREBF2Q12772 1141 aa38.75■■■■□ 3.79
LDB1-204ENST00000490751 FKBP1CQ5VVH2 108 aa38.75■■■■□ 3.79
LDB1-204ENST00000490751 ANKRD13AQ8IZ07 590 aa38.75■■■■□ 3.79
LDB1-204ENST00000490751 ZGPATQ8N5A5 531 aaKnown RBP38.75■■■■□ 3.79
LDB1-204ENST00000490751 SSH3Q8TE77 659 aa38.75■■■■□ 3.79
LDB1-204ENST00000490751 FAM83AQ86UY5 434 aa38.74■■■■□ 3.79
LDB1-204ENST00000490751 PANK1Q8TE04 598 aa38.74■■■■□ 3.79
LDB1-204ENST00000490751 WNK4Q96J92 1243 aa38.74■■■■□ 3.79
LDB1-204ENST00000490751 LAMB1P07942 1786 aa38.73■■■■□ 3.79
LDB1-204ENST00000490751 MYH2Q9UKX2 1941 aa38.72■■■■□ 3.79
LDB1-204ENST00000490751 ABHD8Q96I13 439 aa38.72■■■■□ 3.79
LDB1-204ENST00000490751 ZBTB48P10074 688 aaPredicted RBP38.71■■■■□ 3.79
LDB1-204ENST00000490751 GORABQ5T7V8 394 aa38.71■■■■□ 3.79
LDB1-204ENST00000490751 OS9Q13438 667 aaPredicted RBP38.7■■■■□ 3.79
LDB1-204ENST00000490751 CDC42EP5Q6NZY7 148 aa38.7■■■■□ 3.79
LDB1-204ENST00000490751 ABCF2Q9UG63 623 aa38.7■■■■□ 3.79
LDB1-204ENST00000490751 RPAP1Q9BWH6 1393 aaPredicted RBP38.69■■■■□ 3.78
LDB1-204ENST00000490751 MANSC4A6NHS7 340 aaPredicted RBP38.68■■■■□ 3.78
LDB1-204ENST00000490751 SURF6O75683 361 aaKnown RBP38.68■■■■□ 3.78
LDB1-204ENST00000490751 TBC1D8O95759 1140 aa38.67■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms