RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 GREM2Q9H772 168 aa9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 ABT1Q9ULW3 272 aaKnown RBP9.37□□□□□ -0.91
PRPF4B-208ENST00000490653 PSMD14O00487 310 aa9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 MAP2K1Q02750 393 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 FKBP5Q13451 457 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 UBE3BQ7Z3V4 1068 aa9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 DNAAF4Q8WXU2 420 aa9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 GLIS2Q9BZE0 524 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 GPRC5DQ9NZD1 345 aa9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 PGAP2Q9UHJ9 254 aa9.36□□□□□ -0.91
PRPF4B-208ENST00000490653 ZNF521Q96K83 1311 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 CCDC85CA6NKD9 419 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 ECE2O60344 883 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 EGFRP00533 1210 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 CTSWP56202 376 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 GCKRQ14397 625 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 CCDC152Q4G0S7 254 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 CNOT7Q9UIV1 285 aaKnown RBP9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 PCDHB3Q9Y5E6 796 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 RTL9Q8NET4 1388 aa9.35□□□□□ -0.91
PRPF4B-208ENST00000490653 SNAP23O00161 211 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 UFL1O94874 794 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 GRM1Q13255 1194 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 BEND3Q5T5X7 828 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 USP50Q70EL3 339 aaPredicted RBP9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 TMC4Q7Z404 712 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 TXNRD3Q86VQ6 643 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 MXD3Q9BW11 206 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 ADARB2Q9NS39 739 aaKnown RBP9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 MINPP1Q9UNW1 487 aa9.34□□□□□ -0.91
PRPF4B-208ENST00000490653 LRRC37AA6NMS7 1700 aa9.34□□□□□ -0.92
PRPF4B-208ENST00000490653 FAM155AB1AL88 458 aaPredicted RBP9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 CSF1RP07333 972 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 FOXO4P98177 505 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 TNIP1Q15025 636 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 TBC1D10BQ4KMP7 808 aaPredicted RBP9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 CHMP4AQ9BY43 222 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 ZC3H12CQ9C0D7 883 aaKnown RBP9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 SCN9AQ15858 1988 aa9.33□□□□□ -0.92
PRPF4B-208ENST00000490653 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 CELF2O95319 508 aaKnown RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 VIL1P09327 827 aaKnown RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 ITGA6P23229 1130 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 KLRK1P26718 216 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 MAP2K2P36507 400 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 MLLT1Q03111 559 aaPredicted RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 SLFN5Q08AF3 891 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 ZNF787Q6DD87 383 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 TRIM67Q6ZTA4 783 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 EYA3Q99504 573 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
PRPF4B-208ENST00000490653 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 TAF5LO75529 589 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 ATP2B4P23634 1241 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 DNAJB2P25686 324 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 EMID1Q96A84 441 aaPredicted RBP9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 KAZALD1Q96I82 304 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 BSDC1Q9NW68 430 aaPredicted RBP9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 SCAF8Q9UPN6 1271 aaKnown RBP9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 XDHP47989 1333 aa9.31□□□□□ -0.92
PRPF4B-208ENST00000490653 H7C1D1 291 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 MLLT3P42568 568 aaPredicted RBP9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 CCT4P50991 539 aaKnown RBP9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 PTGDRQ13258 359 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 LMBR1LQ6UX01 489 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 DPF2Q92785 391 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 HHIPL1Q96JK4 782 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 CDC5LQ99459 802 aaKnown RBP9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 TMEM134Q9H6X4 195 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
PRPF4B-208ENST00000490653 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 SLC19A1P41440 591 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 ECE1P42892 770 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 CHRNDQ07001 517 aa9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 TRMT2AQ8IZ69 625 aaKnown RBP9.29□□□□□ -0.92
PRPF4B-208ENST00000490653 GMLQ99445 158 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms