RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
SRRM1-217ENST00000490543 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
SRRM1-217ENST00000490543 BLOC1S3Q6QNY0 202 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 MOB2Q70IA6 237 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
SRRM1-217ENST00000490543 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
SRRM1-217ENST00000490543 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
SRRM1-217ENST00000490543 SCARF1Q14162 830 aa11.75□□□□□ -0.53
SRRM1-217ENST00000490543 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
SRRM1-217ENST00000490543 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
SRRM1-217ENST00000490543 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
SRRM1-217ENST00000490543 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
SRRM1-217ENST00000490543 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-217ENST00000490543 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
SRRM1-217ENST00000490543 TBC1D8O95759 1140 aa11.74□□□□□ -0.53
SRRM1-217ENST00000490543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
SRRM1-217ENST00000490543 EYA3Q99504 573 aa11.74□□□□□ -0.53
SRRM1-217ENST00000490543 ZC3H12CQ9C0D7 883 aaKnown RBP11.74□□□□□ -0.53
SRRM1-217ENST00000490543 SEC31BQ9NQW1 1179 aa11.74□□□□□ -0.53
SRRM1-217ENST00000490543 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
SRRM1-217ENST00000490543 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-217ENST00000490543 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
SRRM1-217ENST00000490543 ZNF280AP59817 542 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-217ENST00000490543 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
SRRM1-217ENST00000490543 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
SRRM1-217ENST00000490543 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
SRRM1-217ENST00000490543 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
SRRM1-217ENST00000490543 ZNF296Q8WUU4 475 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-217ENST00000490543 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
SRRM1-217ENST00000490543 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
SRRM1-217ENST00000490543 CHL1O00533 1208 aa11.72□□□□□ -0.53
SRRM1-217ENST00000490543 UFL1O94874 794 aa11.72□□□□□ -0.53
SRRM1-217ENST00000490543 GMLQ99445 158 aa11.72□□□□□ -0.53
SRRM1-217ENST00000490543 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
SRRM1-217ENST00000490543 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-217ENST00000490543 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
SRRM1-217ENST00000490543 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
SRRM1-217ENST00000490543 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-217ENST00000490543 AGBL3Q8NEM8 1001 aa11.71□□□□□ -0.53
SRRM1-217ENST00000490543 ANKIB1Q9P2G1 1089 aa11.71□□□□□ -0.53
SRRM1-217ENST00000490543 HDAC9Q9UKV0 1011 aa11.71□□□□□ -0.53
SRRM1-217ENST00000490543 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
SRRM1-217ENST00000490543 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 FKBP1BP68106 108 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 TRIM28Q13263 835 aaKnown RBP11.7□□□□□ -0.54
SRRM1-217ENST00000490543 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
SRRM1-217ENST00000490543 R3HDMLQ9H3Y0 253 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 MYOZ2Q9NPC6 264 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
SRRM1-217ENST00000490543 GPR25O00155 361 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 IRF6O14896 467 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 TM4SF4P48230 202 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 PKN2Q16513 984 aaKnown RBP11.69□□□□□ -0.54
SRRM1-217ENST00000490543 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 CCDC85AQ96PX6 553 aaPredicted RBP11.69□□□□□ -0.54
SRRM1-217ENST00000490543 MXD3Q9BW11 206 aa11.69□□□□□ -0.54
SRRM1-217ENST00000490543 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
SRRM1-217ENST00000490543 CCDC146Q8IYE0 955 aa11.68□□□□□ -0.54
SRRM1-217ENST00000490543 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-217ENST00000490543 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
SRRM1-217ENST00000490543 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 TLL1O43897 1013 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 LMOD3Q0VAK6 560 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-217ENST00000490543 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-217ENST00000490543 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-217ENST00000490543 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 ZNF609O15014 1411 aa11.67□□□□□ -0.54
SRRM1-217ENST00000490543 PTPN12Q05209 780 aaKnown RBP11.66□□□□□ -0.54
SRRM1-217ENST00000490543 DUSP27Q5VZP5 1158 aa11.66□□□□□ -0.54
SRRM1-217ENST00000490543 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
SRRM1-217ENST00000490543 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
SRRM1-217ENST00000490543 IRX2Q9BZI1 471 aaPredicted RBP11.66□□□□□ -0.54
SRRM1-217ENST00000490543 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
SRRM1-217ENST00000490543 XDHP47989 1333 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 WNT10BO00744 389 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 FKTNO75072 461 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 HOXB7P09629 217 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 PRKG1Q13976 671 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 PUS10Q3MIT2 529 aaKnown RBP11.65□□□□□ -0.54
SRRM1-217ENST00000490543 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 NOM1Q5C9Z4 860 aaKnown RBP11.65□□□□□ -0.54
SRRM1-217ENST00000490543 DACT2Q5SW24 774 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 MYD88Q99836 296 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 FZD1Q9UP38 647 aa11.65□□□□□ -0.54
SRRM1-217ENST00000490543 PSME4Q14997 1843 aa11.65□□□□□ -0.55
SRRM1-217ENST00000490543 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
SRRM1-217ENST00000490543 PDE8AO60658 829 aa11.64□□□□□ -0.55
SRRM1-217ENST00000490543 NR1I2O75469 434 aa11.64□□□□□ -0.55
SRRM1-217ENST00000490543 SASH1O94885 1247 aa11.64□□□□□ -0.55
SRRM1-217ENST00000490543 PCCAP05165 728 aaPredicted RBP11.64□□□□□ -0.55
SRRM1-217ENST00000490543 GGCXP38435 758 aa11.64□□□□□ -0.55
SRRM1-217ENST00000490543 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms