RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
SKAP2-207ENST00000490456 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
SKAP2-207ENST00000490456 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 LAMB1P07942 1786 aa11.11□□□□□ -0.63
SKAP2-207ENST00000490456 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
SKAP2-207ENST00000490456 TK2O00142 265 aa11.1□□□□□ -0.63
SKAP2-207ENST00000490456 GRM8O00222 908 aa11.1□□□□□ -0.63
SKAP2-207ENST00000490456 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
SKAP2-207ENST00000490456 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
SKAP2-207ENST00000490456 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
SKAP2-207ENST00000490456 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
SKAP2-207ENST00000490456 FTSJ3Q8IY81 847 aaKnown RBP11.1□□□□□ -0.63
SKAP2-207ENST00000490456 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
SKAP2-207ENST00000490456 PDE8AO60658 829 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 CASP7P55210 303 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SKAP2-207ENST00000490456 SCARF1Q14162 830 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 CENPFP49454 3210 aa11.09□□□□□ -0.63
SKAP2-207ENST00000490456 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
SKAP2-207ENST00000490456 PLIN1O60240 522 aa11.08□□□□□ -0.64
SKAP2-207ENST00000490456 CTSWP56202 376 aa11.08□□□□□ -0.64
SKAP2-207ENST00000490456 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
SKAP2-207ENST00000490456 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
SKAP2-207ENST00000490456 KCNQ5Q9NR82 932 aa11.08□□□□□ -0.64
SKAP2-207ENST00000490456 POLLQ9UGP5 575 aa11.08□□□□□ -0.64
SKAP2-207ENST00000490456 KIAA0100Q14667 2235 aaKnown RBP11.07□□□□□ -0.64
SKAP2-207ENST00000490456 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
SKAP2-207ENST00000490456 NF2P35240 595 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
SKAP2-207ENST00000490456 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
SKAP2-207ENST00000490456 CCDC152Q4G0S7 254 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 PLA2G12BQ9BX93 195 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
SKAP2-207ENST00000490456 USP44Q9H0E7 712 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 TRIM17Q9Y577 477 aa11.07□□□□□ -0.64
SKAP2-207ENST00000490456 TBC1D12O60347 775 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 RLBP1P12271 317 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 GPSM2P81274 684 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
SKAP2-207ENST00000490456 MOB2Q70IA6 237 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 OTOP1Q7RTM1 612 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
SKAP2-207ENST00000490456 TTLL11Q8NHH1 800 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 CELF1Q92879 486 aaKnown RBP11.06□□□□□ -0.64
SKAP2-207ENST00000490456 SUCLG2Q96I99 432 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 UTYO14607 1347 aa11.06□□□□□ -0.64
SKAP2-207ENST00000490456 USP17L8P0C7I0 530 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 UBTFL1P0CB47 393 aaPredicted RBP11.05□□□□□ -0.64
SKAP2-207ENST00000490456 MS4A1P11836 297 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 INHBEP58166 350 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 MEIS3Q99687 375 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 GREM2Q9H772 168 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 SEC31BQ9NQW1 1179 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 BRCA2P51587 3418 aa11.05□□□□□ -0.64
SKAP2-207ENST00000490456 FOXO4P98177 505 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 EPHA10Q5JZY3 1008 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 ARMC9Q7Z3E5 817 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
SKAP2-207ENST00000490456 ERO1AQ96HE7 468 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
SKAP2-207ENST00000490456 PODXL2Q9NZ53 605 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 COL4A1P02462 1669 aa11.04□□□□□ -0.64
SKAP2-207ENST00000490456 ZNF646O15015 1829 aaPredicted RBP11.03□□□□□ -0.64
SKAP2-207ENST00000490456 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
SKAP2-207ENST00000490456 DLL1O00548 723 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 UFL1O94874 794 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 CSF1RP07333 972 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 GNAI3P08754 354 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 EN2P19622 333 aaPredicted RBP11.03□□□□□ -0.64
SKAP2-207ENST00000490456 ITGA6P23229 1130 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 RRP1P56182 461 aaKnown RBP11.03□□□□□ -0.64
SKAP2-207ENST00000490456 C20orf194Q5TEA3 1177 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 GMLQ99445 158 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 PTPN22Q9Y2R2 807 aa11.03□□□□□ -0.64
SKAP2-207ENST00000490456 TRIOBPQ9H2D6 2365 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
SKAP2-207ENST00000490456 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
SKAP2-207ENST00000490456 IFIT5Q13325 482 aaKnown RBP11.02□□□□□ -0.65
SKAP2-207ENST00000490456 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 PTCD2Q8WV60 388 aaKnown RBP11.02□□□□□ -0.65
SKAP2-207ENST00000490456 CDC5LQ99459 802 aaKnown RBP11.02□□□□□ -0.65
SKAP2-207ENST00000490456 GGA1Q9UJY5 639 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 HDAC5Q9UQL6 1122 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 LRRFIP2Q9Y608 721 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms