RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 WTIPA6NIX2 430 aaPredicted RBP9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 DPYSL4O14531 572 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 MAP3K7O43318 606 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 INHBEP58166 350 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 CRHR2Q13324 411 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 CAMK2BQ13554 666 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 TTLL12Q14166 644 aaPredicted RBP9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 RSBN1LQ6PCB5 846 aaPredicted RBP9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 MCM10Q7L590 875 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 LRP10Q7Z4F1 713 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 UBE2Q1Q7Z7E8 422 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 PTCH2Q9Y6C5 1203 aa9.53□□□□□ -0.88
PDLIM1-203ENST00000490391 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 RNF223E7ERA6 249 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 RNF40O75150 1001 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 GPSM2P81274 684 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 SP3Q02447 781 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 TCIRG1Q13488 830 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 SLC4A8Q2Y0W8 1093 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 SLC9C1Q4G0N8 1177 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 TBC1D16Q8TBP0 767 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 CELF1Q92879 486 aaKnown RBP9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 PNMA3Q9UL41 463 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 RRP7AQ9Y3A4 280 aaKnown RBP9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 BDP1A6H8Y1 2624 aa9.52□□□□□ -0.89
PDLIM1-203ENST00000490391 CDH23Q9H251 3354 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 NCOR1O75376 2440 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 USP17L8P0C7I0 530 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 ZBTB48P10074 688 aaPredicted RBP9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 MYL6BP14649 208 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 DCTN1Q14203 1278 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 NBPF11Q86T75 865 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 DPF3Q92784 378 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 AAASQ9NRG9 546 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 STXBP5LQ9Y2K9 1186 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
PDLIM1-203ENST00000490391 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 ZSWIM8A7E2V4 1837 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 U2SURPO15042 1029 aaKnown RBP9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 PRKAR2BP31323 418 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 NF2P35240 595 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 NBR1Q14596 966 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 NLRP10Q86W26 655 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 WNK4Q96J92 1243 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 EYA3Q99504 573 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 PTPN18Q99952 460 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 FZD1Q9UP38 647 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
PDLIM1-203ENST00000490391 PIEZO1Q92508 2521 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 WNT10BO00744 389 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 WFS1O76024 890 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 GJA5P36382 358 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 PRKG1Q13976 671 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 ARMC9Q7Z3E5 817 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 SH3TC2Q8TF17 1288 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 CLMNQ96JQ2 1002 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 PODXL2Q9NZ53 605 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 ANGEL1Q9UNK9 670 aaKnown RBP9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
PDLIM1-203ENST00000490391 TESPA1A2RU30 521 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 GDF9O60383 454 aa9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 PDIA6Q15084 440 aa9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 Q7L0L9 218 aa9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 PRDM6Q9NQX0 595 aa9.48□□□□□ -0.89
PDLIM1-203ENST00000490391 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 MTFR1Q15390 333 aa9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 RTF1Q92541 710 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 MTMR10Q9NXD2 777 aa9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 TRMT112Q9UI30 125 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 NR2E3Q9Y5X4 410 aa9.47□□□□□ -0.89
PDLIM1-203ENST00000490391 WIPF1O43516 503 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 UFL1O94874 794 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 PROSER3Q2NL68 480 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 ZBED3Q96IU2 234 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 HTATIP2Q9BUP3 242 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 COL1A1P02452 1464 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1-203ENST00000490391 OTOFQ9HC10 1997 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms